Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0581 |
Symbol | |
ID | 3762406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 655281 |
End bp | 656585 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637785294 |
Product | FeS assembly protein SufD |
Protein accession | YP_390851 |
Protein GI | 78484926 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.19168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTTAG CTGCGACGCC TAAAATGAGC CCTGCGGCTC GACAGTTGTT AGATCAACTG GTAGCCGAAT CTCAAAGACT GAATGAACAA ACCGAAGCGG AAGCCTTAAT CGAAAAACGA CAGGCGGCTC AAGAAAGACT GTTAAGCCTC GGTTTGCCAA CCCGTAAAGA TGAAGATTGG CAGTACACGT CTTTAATACC GATGTTATCG CATGCGTTTG AAATTAAACC CGCTAAAGCT ATTATGCTGG ATGATATCCA GTCTTTTTTG CCAGAATTTG ACACCATTCG TCTGACATTT GTCGACGGTG TTTTTTCAGA AGAGCTTTCT TCTGGGTTTG ATTTTATCCC AGATGCGTTA TCCATTGAAA TGGCGGATGC CGATGCCATC CAATCCATCA ATTTAGAAGA ACAGGCCGAT GCCTTTCAGT TGATGAATGA AATGTTGTTG GATCAAGGCT TGACTATTTC ACTTGAAAAA GGCGAAGCGT TAGCGGTACC TGTGCATATT CTGAATGTGC AAACCCAGTC GGAACAATGG GTTAACTTAC GCACACAGGT TGAGTTGGCG GAAAATTCGG AAATGATGTT CCTTCAACAA TTTGTTTCGT TAGAGTCGGG GTGTTCTGCT TTGGTCAACG ATGTCGCTAA AGTAACTGTT GCTGACCATG CTCGCTTTAA GCAAATTGTG TTACAAGATA TGAATCCGGA AAGTTTTTAT TTTGCGAATC AGTTTTTTGA GCAATCGTCT TCTTCTGTCA TTGAAACTAA CTATATTGGT TTGGGATGCG AGATTTCACG TCATCAGAAC TATTTAATGA TGCTCGGTGA GCACTCTGAA AGTATGCAAA ATTCCATCGG ATTGGGAACG GGAAAACAGA TAATCGATTC TCGTACCTCA ACCACACATC AAGCTGCACA TTGTAACAGT CGACAGTTAC ATAAGTTGGT ACTGGATGAC CAGTCTAGAG GCGTTTTTAA TGGCATGATT CATGTTGTGA AAGGGGCTCA AAAAACCGAT GGGCAAATGG ATAATAAAAA TCTGTTGTTA TCGAAAACCG CTAAAGTTGA TGCCAAGCCA CAGTTGGAAA TTTATGCAGA TGATGTGAAG TGTTCACACG GATGTGCTTC CGGTCAAATT GATGAACAAC AAGTATTTTA TGCGCAAGCC CGTGGGATTC GGAAAGCGGA TGCCTTGCAA CTGATTACCC GAGCATTTTT GTTAGAGCCA TTGGAAAGCA TTACAAACCT GACGTTGCGT AACTGGTTAA CAGAAACCAT CAGCCGTAAA TTGGCAAAGC AATAA
|
Protein sequence | MTLAATPKMS PAARQLLDQL VAESQRLNEQ TEAEALIEKR QAAQERLLSL GLPTRKDEDW QYTSLIPMLS HAFEIKPAKA IMLDDIQSFL PEFDTIRLTF VDGVFSEELS SGFDFIPDAL SIEMADADAI QSINLEEQAD AFQLMNEMLL DQGLTISLEK GEALAVPVHI LNVQTQSEQW VNLRTQVELA ENSEMMFLQQ FVSLESGCSA LVNDVAKVTV ADHARFKQIV LQDMNPESFY FANQFFEQSS SSVIETNYIG LGCEISRHQN YLMMLGEHSE SMQNSIGLGT GKQIIDSRTS TTHQAAHCNS RQLHKLVLDD QSRGVFNGMI HVVKGAQKTD GQMDNKNLLL SKTAKVDAKP QLEIYADDVK CSHGCASGQI DEQQVFYAQA RGIRKADALQ LITRAFLLEP LESITNLTLR NWLTETISRK LAKQ
|
| |