| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0566 |
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| Symbol | |
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| ID | 3762387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 637637 |
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| End bp | 638986 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785279 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_390836 |
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| Protein GI | 78484911 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATCTCG TCGCAGGATT AGGATTAACC GGTCAGAGTG TTTTAAATTA TTTTGCCAGT
CAAGGAGAGC CTTGCTATGC GCTGGACACT CGCCCTGAAT TCGATACATC AGAGCTGGAA
AAGGCTTATC CTGACGTTGC GTTTGCGACG GGAACCTTAC CAACGCAATG GTGTGGAAAG
ATTGATTCCA TTGTCTTGAG CCCGGGAATT GCCAAATCCG AACCTTGGGT GAAGCATTGT
ATTAACCAAG GCACGGAAGT GATTGGTGAT ATTGAATTGT TTGCCCGAGC AGCAGGAAAG
CCAATCGTGG CGATTACGGG ATCGAATGGA AAAAGTACGG TTACGACACT GGTTGCAGAA
GCCTTAAAAG AAGCTGGTTA TGCAGTGGGT GTTGGTGGCA ATATCGGCTG TCCTGCGCTG
GATTTATTGA CCCACCCAAC AGAATTTGAT GTCTACGTTC TGGAGTTATC AAGCTTTCAA
TTGGAAACGA CCTATTCCTT GCAAACGATT GCCGCGACGG TGCTCAATAT TTCCGAAGAT
CATATGGATC GTTATCTCGC CCTTGAAGAT TATATTCAAG CCAAAATGAC GATTTTAAAT
AACACCGAAC TGGCTGTGCT GCCATTGGAT TTTGAGCGTG TTGGTATTGC TCGGCCAGGC
GATGAAGTTC GATTCGGATT GAATTATGCT GAGGCGCTTC CGCCTAAAGA ATATGGGATC
GTGATGAAAA ACGGCCAGGC CTGGCTGGGG TGGGAAGATC ATGCTTCCGT TCCGGTGACG
GCTATGGCTC AGCAAGGATT GCATCATCAG TTAAATGCAT TAGCGATGAT GGCATTGTGC
CGACCATTTG ATCTGTCGGA TGCGGTGTTT GAAAAAGTAC TTAAAACCTT TAAAGGTTTA
CCGCATCGAA CACAGGTTGT GCTTGAACAA GAAGGCGTCC GCTGGATTAA CGATTCGAAA
GGAACCAATG TGGGAGCAAC CGTCACCGCC ATTGAATCGA TTAAAGAAAC GCTTGATGGC
CAAGTCATTT TGATCGCGGG GGGCGTTGGT AAAGAAGCCG ATTTTAACGA ATTGGGTCAA
GCGGTTGTTC AATCATGTCG GCAAGCGATT TTGTTCGGTC AAGATAAGGC GATTATTGCT
CAACAGCTTC CGCAAGAAAA GATCCAGCTT GTGGATACTT TGTCGGAGGC TGTGTTGCTG
GCTAAAACCA TTGCGAAATC GGGAGATGCC GTGTTGTTTT CACCTGCGTG TGCGAGTTTT
GACCAATTTA AAAATTACAT TGAAAGAGGG AATGCCTTTG AGGCATTCGT ACAGCAGTTT
ATTGCCAATG AAGTTGGAGG CAAAAGCTAA
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| Protein sequence | MYLVAGLGLT GQSVLNYFAS QGEPCYALDT RPEFDTSELE KAYPDVAFAT GTLPTQWCGK
IDSIVLSPGI AKSEPWVKHC INQGTEVIGD IELFARAAGK PIVAITGSNG KSTVTTLVAE
ALKEAGYAVG VGGNIGCPAL DLLTHPTEFD VYVLELSSFQ LETTYSLQTI AATVLNISED
HMDRYLALED YIQAKMTILN NTELAVLPLD FERVGIARPG DEVRFGLNYA EALPPKEYGI
VMKNGQAWLG WEDHASVPVT AMAQQGLHHQ LNALAMMALC RPFDLSDAVF EKVLKTFKGL
PHRTQVVLEQ EGVRWINDSK GTNVGATVTA IESIKETLDG QVILIAGGVG KEADFNELGQ
AVVQSCRQAI LFGQDKAIIA QQLPQEKIQL VDTLSEAVLL AKTIAKSGDA VLFSPACASF
DQFKNYIERG NAFEAFVQQF IANEVGGKS
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