Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0563 |
Symbol | |
ID | 3762384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 633518 |
End bp | 635035 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637785276 |
Product | UDP-N-acetylmuramyl-tripeptide synthetase |
Protein accession | YP_390833 |
Protein GI | 78484908 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAT TGGCTGATAT CCTGAGCTTT TTTAAGTTAC CTGAGTCGGT ACTGGTAAAC GGCGCGACGG AAGTGGACGT TTCGGCATTA ACGATTGATT CTCGCCAAGT TGAGAGAGGA ACCGCCTTTA TTGCATTGCA AGGTGGACAA TCTCATGGAA TGGCTCATGC TGAACAGGCG ATTAAACAAG GTGCGAGTTG TATTCTGACG GATAGAGCAG GCCTGGTAGA ATTTAATCAC TCTCACCAGC AACCACTGAA TAAGACGTGT CCTGTTATTG AAGTAGGGTC ATTGAATCAA CAATTGGCGA CCTTTGCTAA ATGGTTCTAC GACGCTCCCA GTGAACGCGT TAACGTGATT GGCGTAACGG GCACCAATGG AAAAACATCT AGCAGTCACT ACATTGCCCA GATGTTGACC GCGTTAAATC AAAAAGTTGC GTTGCTGGGA ACACTGGGTA ATGGCTGGTT CGGGAATTTG CACCCCAGCA TAAACACCAC TGTTGATGTT GTGAGGCTAA ATCATTTACT GAATGGCTTT GCTGAAGAGC AAGCGGATTA TGTGGTGATG GAAGTCTCTT CTCACGCTAT TGAGCTAGGG CGTATTAAAG GAATCGATTT TGATGTGCTC GCGATGACTC AGGTGACACG AGACCATTTA GATTTTCATA AAACTGAAGA AGCTTATCAA GCGGCTAAGA AAAAATTATT TTTAACTTAC TCCAGTCGAT ATCAAGTCAT AAATGCCGAC GATAAGGTGG GACAAGCATT ATTTCATGAA TTGTCAAATA AAGACACAAT AGTACGTTAC TCGCAACAAA CCGCTCAGGC CGATATCGTG TGTTTGGATA GTCACCTGAG CCGCACCGGA ATACACGGCA CATTTACATT GCAAGGCGGC TCTATTCCGT TTGATGTGCC CTTAATGGGG CAGTTTAATT TAGAGAATGT TTTATGTGCC GTTTCTGTGA TGGCGGCTTG TGGCTTTGAA TGGCACCGGA TACAAAAAGC ATTGGTGTTC GTTAAAGCGG TGAAAGGGCG TATGGAGCTG TTAACTCAGC CAGGATACCC TTCAGTATTG ATTGATTATG CGCATACGCC AGATGCACTG GAAGCCATTT TGAAAGCCGT GCAACATCAT GTTTCAGATA GAGATGCGAC AGTGTGGGTG GTGTTTGGTT GCGGAGGGGA TCGCGATACC GGGAAACGTC CTTTAATGGG TGAGATAGCC GAAACGTATG CAAATGAAGT GGTGCTGACC GATGATAACC CTCGAACCGA GTTGCCGGAT GCGATTGTGG CCGATATAAA AAAAGGGATG CATCGTTCCG TGCATGTCGT TCACGACCGT CCAGAAGCGA TTGCTTTTGC GATTAAGAAA GCGTCCAGTC ACGATATAGT GGTGATTGCC GGTAAGGGAC ATGAAGATTA CCAGGAAATT CAAGGAAAAC GCTGGCCAAT GAGTGACCAA AAGATTGTCA AAGATCTTTT GAGTATGGCT GAGGTAAGCA TGGTTTGA
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Protein sequence | MKQLADILSF FKLPESVLVN GATEVDVSAL TIDSRQVERG TAFIALQGGQ SHGMAHAEQA IKQGASCILT DRAGLVEFNH SHQQPLNKTC PVIEVGSLNQ QLATFAKWFY DAPSERVNVI GVTGTNGKTS SSHYIAQMLT ALNQKVALLG TLGNGWFGNL HPSINTTVDV VRLNHLLNGF AEEQADYVVM EVSSHAIELG RIKGIDFDVL AMTQVTRDHL DFHKTEEAYQ AAKKKLFLTY SSRYQVINAD DKVGQALFHE LSNKDTIVRY SQQTAQADIV CLDSHLSRTG IHGTFTLQGG SIPFDVPLMG QFNLENVLCA VSVMAACGFE WHRIQKALVF VKAVKGRMEL LTQPGYPSVL IDYAHTPDAL EAILKAVQHH VSDRDATVWV VFGCGGDRDT GKRPLMGEIA ETYANEVVLT DDNPRTELPD AIVADIKKGM HRSVHVVHDR PEAIAFAIKK ASSHDIVVIA GKGHEDYQEI QGKRWPMSDQ KIVKDLLSMA EVSMV
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