Gene Tcr_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0530 
Symbol 
ID3761500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp594321 
End bp594650 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content46% 
IMG OID637785242 
Producthypothetical protein 
Protein accessionYP_390800 
Protein GI78484875 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00315324 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGGTG GAAAAGGTGG TTTGGGCAAC TTGATGAAAC AAGCCCAGGA AATGCAAAAA 
AACATGCAAG CAGCGCAAGA TGAAATTGCC AAAATGGAAA TTTCAGGTGA AGCAGGCGGA
GGCATGGTGA AAGTTATCAT GACAGGAAAG CATGAGCTGG TTAAAGTTGA GATTGATGAC
AGCCTGATGG ATGATAAAGA AATGCTGGAA GATTTGTTTG CGGCGGCCGT GAACAGCGCG
GCGCGTCGTG TTGAAGAAAC AACCCAGGAA AAAATGGGTG GCTTAACCGG TGGGATAGAT
TTGCCACCGG GAATGAAGAT GCCATTTTAA
 
Protein sequence
MLGGKGGLGN LMKQAQEMQK NMQAAQDEIA KMEISGEAGG GMVKVIMTGK HELVKVEIDD 
SLMDDKEMLE DLFAAAVNSA ARRVEETTQE KMGGLTGGID LPPGMKMPF