Gene Tcr_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0527 
Symbol 
ID3761495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp589137 
End bp590231 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content48% 
IMG OID637785238 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_390797 
Protein GI78484872 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000000582324 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATT TGTTATCCCC TCTCAAAATT GGAAACACGG AGTTACCTAA TCGTGTCTTC 
ATGGCTCCTT TAACCCGAAG TCGTGCTCAA CAACCTGGAA ATGCACCAGG TGATTTGAAT 
GCCGAATATT ATTCACAGCG TGCCACCGCT GGATTAATCG TCACCGAAGC CACACCGGTT 
TCTCAACAGG GACAGGGTTA TGCTTATACA CCGGGAATTT ACACCGATGT TCAAGAAGCG 
GGTTGGAAAA AAGTCGTAGA CAAAGTCCAT TCAAAAGGCG GCCACATGTC TTTACAGCTG 
TGGCATGTTG GGCGCATTTC AAATACAGAA CTTCAAGAAG ATGGAGCGGC ACCTGTCGCG 
CCCTCTGCAA TTCAGGCAGA AAACAGTCAA TGCAGTGCAC CCGTTGAAGG TGGCGCTTTA 
AAAATGGTGC CTTGCGCCAT GCCAAGAGCG TTAGAGACTG ATGAGTTACC AGGCATCGTT 
GAACAATATC GTCAAGCAGC CATTCGCGGT CTAAAGGCTG GGTTTGATTT CTTTGAAGTT 
CACTCGGCCA ATGGGTATTT ACTGCATCAG TTTTTAGCCA CCAACACCAA TCATCGAACC 
GATGAATATG GCGGCAGCAT TCAAAACCGT GCTCGTTTGG TTTTGGAGGT TTTAGATGCG 
GTAATTAAAG AGGTTGGTAA AGAGAAAGTC GGTGTTCGTT TATCTCCTAA CTTCGTTGCG 
CATGATATGA ATGATGAGGC GTCTGAAGAA ATGACGTTGT ATTTGGCCAA AGAATTTTCC 
AAACGCGAAA TTGCGTATCT GCATATTGCC GAACCCGACT GGGCGGGAGG CGCCCCCTTA 
ACAGATGAGT TTCGTTCGGC ATTACGAGAT CAGTTTAACG GTGCTTTAAT TTTCTGCGGT 
AACTACGATG CCGAAAAAGC TGAACAGACA CTCGCCAAAG GCTTGGCCGA TGCCATCGCA 
TTCGGGCGCG CATTTATTGC CAACCCTGAC CTAGTGGCGC GCTTTAAACA GGGGGCTGAG 
CTGAATACAC CGAACCCGGA TACTTTTTAT GGCGGCGGCG CGGAAGGTTA TACCGATTAC 
CCATTTATGA ATTGA
 
Protein sequence
MKHLLSPLKI GNTELPNRVF MAPLTRSRAQ QPGNAPGDLN AEYYSQRATA GLIVTEATPV 
SQQGQGYAYT PGIYTDVQEA GWKKVVDKVH SKGGHMSLQL WHVGRISNTE LQEDGAAPVA 
PSAIQAENSQ CSAPVEGGAL KMVPCAMPRA LETDELPGIV EQYRQAAIRG LKAGFDFFEV 
HSANGYLLHQ FLATNTNHRT DEYGGSIQNR ARLVLEVLDA VIKEVGKEKV GVRLSPNFVA 
HDMNDEASEE MTLYLAKEFS KREIAYLHIA EPDWAGGAPL TDEFRSALRD QFNGALIFCG 
NYDAEKAEQT LAKGLADAIA FGRAFIANPD LVARFKQGAE LNTPNPDTFY GGGAEGYTDY 
PFMN