Gene Tcr_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0464 
Symbol 
ID3761565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp521125 
End bp522162 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content39% 
IMG OID637785175 
Productporin 
Protein accessionYP_390734 
Protein GI78484809 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000937994 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA ATATTATCGC TCTAGCAGTT GCATCTGCTA TCGCCGCTCC AGTTGCTATG 
GCTGACGCTC CGACTGTATA TGGTCAAATG CAATTATCAA TCGACTCTAT TAGTTATAAA
GATACTAATG GTGATAAAGT TCAAGCAAAA TCTGGTTCAC AAGTAAACAG CTATAATTCT
CGTGTTGGTG TTAAAGGGTC TGCTGACCTA GGGAATGGTT TAAAAGCAAT CTATAAAGCT
GAGTTTAAAG TTAACCCTGA TTCTAAAGAA AGCTTTGAAA ACCGTAACCA ATATGTTGGT
TTATCGGGTG GTTTCGGGAC TGTTTTACTA GGTCGTCATG ACACGCCTTA TAAAATGGCT
CAACCAAAAG ATTTATTTAA CGATGCTCGT GGTGATAACA AGCCTATGAC AGGTGGTTTA
GGTATCCTTG GAAATGGTGG TGAAAACCGT GTGTCTAATG CATTAGCTTA TGTTTCACCT
TCTTTCGGTG GTGTTAAACT GGTTGGTGCT TTGGTTCCTA AAGAAAATTC CGGTGATACA
ACGAAAGAAT CTTCTATGAC TGATTGGGTT TCTGTAGCAG CGATGTACGG TTCTAAGAAA
AAAGGTCTTT ACCTGACGGC AGCAATGGAT TCAGCGAATA AAGCTTTGAT TGGTGATGGT
GCTGGCGGGT CAGCTGCAGG TGATGCTACT CAATATCGTT TAGCAGCTCA GTATGCTGTT
GCAGGTTTAA TTGCAAACGC AATGTACCAA GATGTTTCTG GTGATGGTGC AAAAAAAGAA
GGTTCTAACA TCATGTTGAA CGTTGGGTAT AAAATGGGTA ACCTAATGCC TAAAATCAAG
TACTCAATGA ATGATTACAA AGATAATGCA ATTAAAGATT CTACCGGTTT AGGATTGGGT
GTTGATTATG CTTTAGCTAA GAAAACTAAA GTTTACGCTG AGTATGTCTC TTATGATAAA
ACAACTTATG ATCGTAAGAA TATCGGTGGT AAAGCATCTG ATTCAGCGAT TTCAGTTGGA
TTGTTCCACA AGTTCTAA
 
Protein sequence
MKKNIIALAV ASAIAAPVAM ADAPTVYGQM QLSIDSISYK DTNGDKVQAK SGSQVNSYNS 
RVGVKGSADL GNGLKAIYKA EFKVNPDSKE SFENRNQYVG LSGGFGTVLL GRHDTPYKMA
QPKDLFNDAR GDNKPMTGGL GILGNGGENR VSNALAYVSP SFGGVKLVGA LVPKENSGDT
TKESSMTDWV SVAAMYGSKK KGLYLTAAMD SANKALIGDG AGGSAAGDAT QYRLAAQYAV
AGLIANAMYQ DVSGDGAKKE GSNIMLNVGY KMGNLMPKIK YSMNDYKDNA IKDSTGLGLG
VDYALAKKTK VYAEYVSYDK TTYDRKNIGG KASDSAISVG LFHKF