Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0449 |
Symbol | |
ID | 3761476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 502351 |
End bp | 503727 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637785160 |
Product | aromatic hydrocarbon degradation protein |
Protein accession | YP_390719 |
Protein GI | 78484794 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CAAGAATCGC TTTAGCAATT GCAACTGCTG CAATGGTTTC AACGCCTGTT CTAGCAACGA ACGGTACAAA CATGATTGGT TTAGGCGCAC AATCAAATGC AATGGGTGGT ACAGGGGTAG CGGCTAGCTA CGGTGCAGAA ACAGTTATTG CTAACCCAGC CATGATCGGT AAAACCACAG GAACTGAAAT GACTTTCGGC GGCACTTTGT TCCAACCATC CGTTGAAACA ACAAACAATA TCAAAAACAG CGCTGTTGCT GCAGCTAATG GCATTACGTC TGCACAGGCT GCTGCTGCCG GAGCACCGAT TGGAAGTGCA ACCAGTGATG CAGATACCAA TGTTATTCCA GCAGTTTCTT TATCAAGCCG AATTAATGAC AAATTAACTT TCGGTATTGG TATGTTTGGT ACATCAGGTA TGGGGGTTGA TTACCAAGAT GAAGACATGT TGTTTAATGC ACAAACAAAT ATGCAAATCA TGAAGTTCGC TCCAACATTA GCGTTTAACT CATCAAAATT TGGGATTGGT GTTTCGCCAA TTTTACAGTA TGGCTCATTA GACATTAACT ACCAAACTCA AATGACAAAT AATTCTGGTG CACCAATGTA TGTTCAAGGC GGTGGAAACA TCAACTCAAC TCCATCGGCA ACCCCTGCCA TGAAAACCGT AGGTCACGGC ATGGCTTCTG ACCTTGGAAT GGGATATAAC ATTGGTGGTT ACTTTAATAT CACTAATGAC TTAACCGTAG CAGCGTCTTA CTTGTCGCCT ATCAACATGA AATATAAAGG TCAACTATCT ACTGCATCAG GTGCGTTTGT TAACCCAGCC TCTGACTTTA CAACACCGTT CAGCGACAAT CTTGAACAGC CTTCTGAAAT CAAGGTCGGT GCGGAATACA TCATGGGAAG ATTCTCTGTC AACGCCGATT ATAAAAAAGT GGCTTGGGGA TCTGCTAAAG GATATAAAGA CTTTGGCTGG GAGGACCAGG ACGTTTACTC TTTAGGTGCT AAATTTGCTA CAAACAACTA TTGGTTAGGG GCAGGTTATA ACTACGGAAG CAACCCAATT AAAGAACAAG ATGGAACAAG CTATAAAGGC GCTGTTATCA ACATGTTTAA CAACACGTTC TTCCCTGCAA TCACAGAAAG TCACTTTACC TTTGGTGGTG GCTACTCTAT TACCAAGCAT ACGACCTTAG AAGGGTCTGT TGTATATGCG CCAGAAGTTG AAAACTCTGT TGACACGACA GCTGTCTCTT CAGCATTTGC ATCAGGAATG GCAGGCACAC CAACGGCAGC TGCTAGTACC AGTACGACAA AGCATTCACA GATTGGCTAT ACAGTGCAGG TAAAATATAA TTTTTAA
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Protein sequence | MKKTRIALAI ATAAMVSTPV LATNGTNMIG LGAQSNAMGG TGVAASYGAE TVIANPAMIG KTTGTEMTFG GTLFQPSVET TNNIKNSAVA AANGITSAQA AAAGAPIGSA TSDADTNVIP AVSLSSRIND KLTFGIGMFG TSGMGVDYQD EDMLFNAQTN MQIMKFAPTL AFNSSKFGIG VSPILQYGSL DINYQTQMTN NSGAPMYVQG GGNINSTPSA TPAMKTVGHG MASDLGMGYN IGGYFNITND LTVAASYLSP INMKYKGQLS TASGAFVNPA SDFTTPFSDN LEQPSEIKVG AEYIMGRFSV NADYKKVAWG SAKGYKDFGW EDQDVYSLGA KFATNNYWLG AGYNYGSNPI KEQDGTSYKG AVINMFNNTF FPAITESHFT FGGGYSITKH TTLEGSVVYA PEVENSVDTT AVSSAFASGM AGTPTAAAST STTKHSQIGY TVQVKYNF
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