Gene Tcr_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0422 
Symbol 
ID3761241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp471872 
End bp474145 
Gene Length2274 bp 
Protein Length757 aa 
Translation table11 
GC content46% 
IMG OID637785133 
Productvon Willebrand factor, type A 
Protein accessionYP_390692 
Protein GI78484767 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4548] Nitric oxide reductase activation protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAG ACCTCATAAC AGAAGTCGTT TCTGAGTATC AAGACAAATT CACCTGTAAT 
TTCCCCAAGG CGTTGGAGGT TTTTCCGGTG TGCATCGAAG AGGCTGCCCA ACAACTTTCA
GACGAAGGGG TGACTGCCTA TATTGATGGT GCCAACTTCC TTTGTAAGAT AGGCATGGGC
GTTGAACCGG TTCTGGTCTA CCTTGAGATC ATGCCGGAAA TCGCCTCTCA TATTGGAAAA
GGCACCATGA AAATGGTGGC CGACTACGGC TATAAGTTAG CGCGCAGCCC TAACAAAAAA
GCCTTAATTC CTTTTTTAGC TTCACTCAGC AGTGTCTGCC GACGCATCGA TACTTTGGAA
GACCTTCAGC ACTATCTGGA CATTATTGAT GAATACGTCG ATAAAACACA AACCGTCATT
CATGGTCATC ACTCTTTGTA TGAAAGCCCG GGCATGATTC CTTTATTGGA ATCCATGCCC
CAACTGATTT CCAAATTGAG TCTGGCCGGA ATCCGTAATT TTATTGATTA TGGCGCACGC
AACTATAATG ATGCGCCCGA CCAGCAAATT GCTTATTTCA GCTTAGAATC GCACGATGCC
AAAAGTATCA TTCAACGTGA ACGTCAAGGC ACAACGTTCA AAGACGTGGA ACGTCATTTG
GATATGTTAA AAGACTGCAT GTGGCATTGT GACCGCCCTT TTTCGGTTTT CTCCACCGCA
TTCGATCAAC TTCGTAAACC CGTTCCGTAT TTGGATGAAG AACTCATTGC CGTGCCAGAT
GTGTATGAAG ATGAAAATGG TGTTAGCGGT TTGGATCGCT ATCGCGCCAT GCTAGCGCAT
ATGATGGCGC ACAAAGAATG GTCAACCAAG TTGATGGCCG ATAATTTCGC CCCCCATATG
CAGCTTTTTA TTTCCACCTT TGAAGACTGC CGAGTGGAAA GACTGGCCAT TCAACGATTC
CCCGGGTTAA AACCCTTGTT TCTTGCACTC CACCCAGTGC CGGAAAAAGG CGCGTGCGAC
CCGATCCAAC AGGCCTGTTT AAGATATCGC TCTACACGCC TGTCTCGCGC CTTAATGGAT
GAAACATTTG ACCCGGAAAA CCCATTGATC GAAGACTTCC GCACCCAGTT CAATGCCATT
ATGGCTGAAA AAGGCGACGC CTCCACCACA CAAGACATGG CGAAACTGGG CACGAACTTC
TATGTCAAAT CGCGTAAAAA AACCGACAGC TTGCCGAACG TTTTCTTTGA CGACACCGAA
GTCAGTTACC GAGATGACAA TCGCTTTATC TGGTTCCATT ACGAAGAGAA TGACGAAGCG
GAAGATTTCC ATAACAACGA ATATCACTCC GATGAAAAAA TAGTCGACGA CGCAAACAGT
TTACCGCCTC GCCACTATGA TGAATGGGAT TATATTTCTG AAAGCTATCG TCCAGACTGG
GCGACGGTTT ATGAACGCTT ACACCCTTCT GGAGATTCAA ATAAAATTGA CCGCCTGATG
GAAAAACATG ACGGTTTGGC CAAACGTTTG AAAAAAATGA TTGAAGCCCT TAAACCTCAA
AACAAAAAAC GCATTCGGTT TCAGGAAGAA GGGGAAGAGC TGGATTTGGA CATCGCGATT
CGTTCCGTCA TTGATTTTAA AAGCGGGCAA GCACCCGACC CTCGCATCAA CTACAGCCAT
ACCACTGACA GCCGAAACAT TGCCGTCATG TTACTGGTGG ACACCTCACA ATCGTTAAAA
GAGCGCAATC AGGAAACGGG TCAAACTTTA CTGGAATTAA GTGAAGAAGC TCTTGCCATC
ACCGCGTGGA CCATTGAACA GCTAGGGGAT AAGTTCGCCA TTGCGGGCTT TTGCTCGGAC
ACGCGTCATG AAGTTCGCTA TCAGCATATC AAAGGCTATT CAGAGCATTA TGGCGATGAG
GTCAAGTCTC GCATTGCCGC GATGGAAGCC TCTTATTCCA CCCGAATGGG AGCCGCCATG
CGTCATGCGG CACATTATCT GGAAGCACAG CAGGCTGAGA AAAAACTGAT GCTGATTTTA
ACCGATGGCG AGCCGGCGGA TATTGACACC AAAGACCCAC AGGTTCTTAT TCAAGATACC
CATAAAGCGG TCGAAGAACT GAAAAGCAAA GGAATCTATT CTTACTGCAT TACCTTAGAT
CCGAATGCCG ATGAATACGT TGAGACCATT TTTGACAACC ACTATACCGT CATTGACCAT
GTTGATAAGC TGCCAGAAAA ATTACCTCAA GTCTTTATGA AAATCACACA ATAA
 
Protein sequence
MNADLITEVV SEYQDKFTCN FPKALEVFPV CIEEAAQQLS DEGVTAYIDG ANFLCKIGMG 
VEPVLVYLEI MPEIASHIGK GTMKMVADYG YKLARSPNKK ALIPFLASLS SVCRRIDTLE
DLQHYLDIID EYVDKTQTVI HGHHSLYESP GMIPLLESMP QLISKLSLAG IRNFIDYGAR
NYNDAPDQQI AYFSLESHDA KSIIQRERQG TTFKDVERHL DMLKDCMWHC DRPFSVFSTA
FDQLRKPVPY LDEELIAVPD VYEDENGVSG LDRYRAMLAH MMAHKEWSTK LMADNFAPHM
QLFISTFEDC RVERLAIQRF PGLKPLFLAL HPVPEKGACD PIQQACLRYR STRLSRALMD
ETFDPENPLI EDFRTQFNAI MAEKGDASTT QDMAKLGTNF YVKSRKKTDS LPNVFFDDTE
VSYRDDNRFI WFHYEENDEA EDFHNNEYHS DEKIVDDANS LPPRHYDEWD YISESYRPDW
ATVYERLHPS GDSNKIDRLM EKHDGLAKRL KKMIEALKPQ NKKRIRFQEE GEELDLDIAI
RSVIDFKSGQ APDPRINYSH TTDSRNIAVM LLVDTSQSLK ERNQETGQTL LELSEEALAI
TAWTIEQLGD KFAIAGFCSD TRHEVRYQHI KGYSEHYGDE VKSRIAAMEA SYSTRMGAAM
RHAAHYLEAQ QAEKKLMLIL TDGEPADIDT KDPQVLIQDT HKAVEELKSK GIYSYCITLD
PNADEYVETI FDNHYTVIDH VDKLPEKLPQ VFMKITQ