Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0414 |
Symbol | |
ID | 3761195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 463471 |
End bp | 466035 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637785125 |
Product | AAA ATPase |
Protein accession | YP_390684 |
Protein GI | 78484759 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.817995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGATA AGTTTACCTC TCAGTTTCAG TCCGCCTTGG GTCAAGCGCA ATCGATCGCG CTAGGTTTGG GAAATCAATT TATTGAACCG TTGCATATTT TATCTGCGCT ACTGGCCGAA CAAACGTCTT TGTTGCAATT GGCGGGGGTC AATGTCGCCC AGTTAAAGCA AAGTGTGGAT GAGAAATTAC AAACCTTACC AAAAGTCTCT GGTGCCGCTG GCGATGTTCA GTTGTCGCAA AGCGGTGGGC GCGTATTAAA TTTAATGGAT CAAATTGCTC AGAAAAAAGG GGATGCGTAC ATTGCCAGCG AACTCTTTTA TCTGGCGGCA TTACAATCGG GCGACCCTGT TAAAGAGCTC TTAAAGAAAG CAGGGGCAAC CGAACAAACG ATTGAATCAG CCATCGAACA AGTCAGAGGG GGCGAAAGCG TGCAAGATCA AAATGCAGAA GAAAACAGAC AAGCGCTGGA TAAATATACA TTGGATTTAA CCGAACGTGC TCGGAGCGGG AAATTGGACC CTGTGATTGG CCGAGACGAT GAAATTCGTC GAGCGGTGCA GGTGTTACAG CGTCGAACGA AAAACAATCC GGTTTTAATC GGGGAGCCAG GGGTTGGGAA AACCGCCATT GTTGAAGGGT TGGCGCAACG TATTGTGAAT GGCGAAGTGC CGGAAGGTTT GAAAAACAAA CGCCTTTTAT CCTTAGATTT GGCAGGACTC TTGGCCGGAG CAAAATACCG TGGTGAATTT GAGGAGCGTT TGAAAGCCTT ATTAAAAGAT TTAGAAAAAC AAGAAGGGTC CGTTATCTTG TTTATCGATG AAATTCACAC CATGGTTGGG GCCGGTAAAA CCGAAGGCTC GATGGATGCT GGAAACATGC TGAAACCGGC CTTGGCACGA GGAGAACTTC ATTGTATTGG TGCGACAACG TTGGACGAGT ATCGCGAAAA CATTGAAAAA GACGCGGCCT TGGAACGTCG TTTCCAAAAA GTCATTGTGG ATGAACCATC GGAAGAAGAC ACCATTGCGA TTTTACGTGG ATTGAAAGAG CGCTATGAAG TGCATCATGG GGTCGCGATT ACCGATCCGG CCATTATTGC AGCCGCGCAT TTATCGCAAC GCTATATCAC GGATCGTCAG TTACCGGATA AAGCGATTGA TTTGATCGAT GAAGCGGCTT CACGTATTCG AATGGAAATT GACTCCAAAC CGGAAGAAAT GGACCGTTTG GATCGACGCT TGATTCAGTT GAAAATCGAG CGTGAGGCGT TGAAAAAAGA AAAAGATGAA GCGTCGAAAA AACGTTTAGG CGTGTTGCAA GAATCGATTG ATGAAATGGA GAAAGAGTAC GCCGACTTAG AAGAAATCTG GAAAAAAGAT AAAGCCGCAT TGCAAGGCGC GAAACAGTAT AAAGAAGAAC TGGATAAAGC CCGTATTGAA ATGGAAGCTG CGCACCGTGA AGGGAATTTA GGCAAAATGT CTGAGCTTCA GTATGGAGTG ATTCCGGATT TGGAAGCCAA AATCAAAGCC GCAGAAGAGG CCGAAGGGGA AGAAGACGGT CAAATGCATC TGTTACGTAA TAAAGTCACG GAGGAAGAAA TCGCCGAAGT GGTGGCACGC TGGACCGGGA TTCCAATTTC CAGAATGCTG GAAGGCGAGC GTGATAAATT GTTGCGCATG GAAGAAGCGA TTGGCGCGAA AGTGATTGGA CAAAGCGAAG CGGTTTCAGC CGTTTCCGAT GCCATTCGCC GCTCTCGTGC CGGTTTGTCC GATCCAAATC GTCCGAATGG ATCTTTCTTA TTCTTAGGGC CAACAGGGGT CGGGAAAACC GAGTTGACTA AAGCCTTGGC GGATTTCCTG TTCGACACGC AAGATGCCAT TGTACGTTTG GATATGTCTG AATTTATGGA AAAACACTCA GTGGCTCGTT TGATTGGTGC GCCTCCCGGG TATGTCGGTT ATGAACAAGG TGGGTATTTA ACGGAAGCGG TTCGCCGTAA ACCCTATTCG GTGATTTTGC TGGATGAGGT GGAAAAAGCC CATCCGGATG TCTTTAATAT CTTGCTACAA GTTTTAGATG ACGGGCGATT AACCGATGGA CAAGGGCGCA CGGTGGACTT TAAGAATACC GTAATCGTGA TGACGTCGAA TTTGGGGTCA CAAATCATTC AAGAAAAAAC AGGTCAAGCG ACCTATGAGG AAATGAAGCG TGATGTGATG GATGTGGTCG GAAGTCATTT CCGCCCAGAA TTCATTAACC GAATTGACGA TATTGTGGTG TTCCATCCAT TGGATAAAGC ACAGATTCGT TCGATTGCCG ACATTCAGTT GAATCATTTA CGTCAGCGTT TAGCGGACAA TGAATTGAGT CTGGAGTTAT CCGACGCCGT GTTGGATAAA ATCGCTGAAG CTGGGTTTGA TCCCGTCTAT GGCGCCCGCC CTTTAAAACG CTCGGTGCAG CAAATGGTTG AAAACCCATT GGCGCAACGT TTGTTAAAAG GCGAGTTTGT CGCGGGTGAT ACCGTTCATG TTGGTTTGAC AGACGGTGAA ATTGATTTTC ATTAA
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Protein sequence | MMDKFTSQFQ SALGQAQSIA LGLGNQFIEP LHILSALLAE QTSLLQLAGV NVAQLKQSVD EKLQTLPKVS GAAGDVQLSQ SGGRVLNLMD QIAQKKGDAY IASELFYLAA LQSGDPVKEL LKKAGATEQT IESAIEQVRG GESVQDQNAE ENRQALDKYT LDLTERARSG KLDPVIGRDD EIRRAVQVLQ RRTKNNPVLI GEPGVGKTAI VEGLAQRIVN GEVPEGLKNK RLLSLDLAGL LAGAKYRGEF EERLKALLKD LEKQEGSVIL FIDEIHTMVG AGKTEGSMDA GNMLKPALAR GELHCIGATT LDEYRENIEK DAALERRFQK VIVDEPSEED TIAILRGLKE RYEVHHGVAI TDPAIIAAAH LSQRYITDRQ LPDKAIDLID EAASRIRMEI DSKPEEMDRL DRRLIQLKIE REALKKEKDE ASKKRLGVLQ ESIDEMEKEY ADLEEIWKKD KAALQGAKQY KEELDKARIE MEAAHREGNL GKMSELQYGV IPDLEAKIKA AEEAEGEEDG QMHLLRNKVT EEEIAEVVAR WTGIPISRML EGERDKLLRM EEAIGAKVIG QSEAVSAVSD AIRRSRAGLS DPNRPNGSFL FLGPTGVGKT ELTKALADFL FDTQDAIVRL DMSEFMEKHS VARLIGAPPG YVGYEQGGYL TEAVRRKPYS VILLDEVEKA HPDVFNILLQ VLDDGRLTDG QGRTVDFKNT VIVMTSNLGS QIIQEKTGQA TYEEMKRDVM DVVGSHFRPE FINRIDDIVV FHPLDKAQIR SIADIQLNHL RQRLADNELS LELSDAVLDK IAEAGFDPVY GARPLKRSVQ QMVENPLAQR LLKGEFVAGD TVHVGLTDGE IDFH
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