| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0409 |
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| Symbol | |
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| ID | 3761190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 459494 |
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| End bp | 460447 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637785120 |
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| Product | Phage integrase |
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| Protein accession | YP_390679 |
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| Protein GI | 78484754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.383536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTGATT ATCAACGCTT TATCAAGCAA TTAAAGTTGG AAAACAAGTC CGAGCATACG
ATCTCAAACT ATCAACGGGA CTTGATGGGC TTACTGGTGT TTTATTTAGG CGATTACCTT
GAACAACCCC TAGACGAAAA AGCCCTTAAA AGTGACCAGG CCTGGGCATT TTTGGATCAA
TTTGATGACT GGCAGGCCAT TAAGCTGCCG GTGTTGCAAG CTTTTATTGC GTTTCGTATG
CAACAGGGCA TTGCCGCCCG CAGCATTGCG CGACAATTAT CCGCCATTCG AGCTTTCTAC
GCGTTTTTGA TTGAGCAAGG CCGAGCCAAC CATAACCCGG CAAAAGGGTT GAAAGCGCCA
AAACAGCCCA AAGCGTTGCC TAAAAGTTTG GATGTAGATT TAACACGCCA GCTATTGGAG
CAACCTCTGA AAACCTGGCA GGATGTGCGC GATCAAGCCA TTTTTGAAAT TCTGTATTCC
GGTGGGTTGC GGGTTTCGGA GCTGGTAGAA CTGGACTTAT CACCGGGATT GGATGGCTTA
GCGTCTGGCT GGGTTCGAGT GCTCGGGAAA GGGCAGAAAG AACGAGATGC TCCTGTCGGA
CAGCCGGCAC AAAAAGCATT GCATCGTTGG CTTGAGATTC GATCAGACTA TGCCCAGCCG
GGAGAGCAAG CCGTTTTCGT CAACCGATTT GGGAAGCGAC TAGGGGTCAG AAGCATTCAA
ACACAACTGG ATAAACGAAC CTTACAGGCG GGGTTGCCTA CCAAAATGTC GCCCCATAGA
TTGCGGCACG CCTGTGCAAC GCATGTGTTA GAATCTAGCG GAGATTTAAG GGCGGTGCAA
GAGATGTTAG GCCATGCCAA TTTGTCGACG ACCCAGATCT ATACCAAGCT CGATTTGCAG
CATTTAGCCA CGGTGTACGA CAAAGCGCAT CCCCGAGCCA AGAAAAAACC TTAG
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| Protein sequence | MSDYQRFIKQ LKLENKSEHT ISNYQRDLMG LLVFYLGDYL EQPLDEKALK SDQAWAFLDQ
FDDWQAIKLP VLQAFIAFRM QQGIAARSIA RQLSAIRAFY AFLIEQGRAN HNPAKGLKAP
KQPKALPKSL DVDLTRQLLE QPLKTWQDVR DQAIFEILYS GGLRVSELVE LDLSPGLDGL
ASGWVRVLGK GQKERDAPVG QPAQKALHRW LEIRSDYAQP GEQAVFVNRF GKRLGVRSIQ
TQLDKRTLQA GLPTKMSPHR LRHACATHVL ESSGDLRAVQ EMLGHANLST TQIYTKLDLQ
HLATVYDKAH PRAKKKP
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