Gene Tcr_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0408 
Symbol 
ID3761189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp458753 
End bp459424 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID637785119 
Productnitroreductase 
Protein accessionYP_390678 
Protein GI78484753 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.341785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA CCGTATCCGA TGCTATTAAA GCCAGACATT CCGCCCGCGC CTTTCTAGAC 
AAGGGCATCG ATGAGAAACA AATATATCAA ATTCTGGACA TCGCACGCCG CGCGCCTTCC 
GGTGTCAACA CACAACCTTG GCAAGTCTCC GTGGTATCCG GTCAGACAAA GCAGACGTTG 
GAAGCCAAAA TGCTGGCTCA ATTTAACGCC GGTCAGCGAG GCGAAATGCA GTATCAATAC 
TACCCGAAAA CCTGGGTGCC TCCTTACAAG CAACGCCGGG TCGAGACTGG AAAACAACTC 
CATGGCGCGC TGAACATCGC CCGAGAAGAT AAAGAAAAAC AACACGAGCA ATGGGCCGCG 
AATTACCGAG CATTTGATGC GCCAGTCGCA CTTTTTTTCT GGATAGACAA CGTCCTTGAA 
ACCGGTTCCT ATCTGGATTA CGGCATGTTT TTACAAAACA TTATGTTACT CGCCACAGAG 
CAAGGGCTCT CAACCTGTCC ACAAGGTGCG TTAGGCGAAT ACCCAGACAT CGTTCGACAA 
ACGTTGAAAG TGTCTGACGA TAAAATTTTA CTTGGCGGCA TGGCGATCGG TTATGAAGAT 
AACAACCATC CCGTCAATCA ATATCGAACC GAAAGAGAAC CGGTTGAACA CTTTACTCAG 
TTCTTTGATT AA
 
Protein sequence
MTQTVSDAIK ARHSARAFLD KGIDEKQIYQ ILDIARRAPS GVNTQPWQVS VVSGQTKQTL 
EAKMLAQFNA GQRGEMQYQY YPKTWVPPYK QRRVETGKQL HGALNIARED KEKQHEQWAA 
NYRAFDAPVA LFFWIDNVLE TGSYLDYGMF LQNIMLLATE QGLSTCPQGA LGEYPDIVRQ 
TLKVSDDKIL LGGMAIGYED NNHPVNQYRT EREPVEHFTQ FFD