Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0393 |
Symbol | |
ID | 3760909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 444278 |
End bp | 444859 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785103 |
Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
Protein accession | YP_390663 |
Protein GI | 78484738 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000102874 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAG TATGGACTGC AGAACTTCGT ACTGAAGAAG GGAAAGGTGC GAGCCGCCGC CTTCGTCATG CGGGGAAAGT ACCTGCGATC ATCTATGGTG GTGACGTAGA CGCAAAATCA ATCGCATTGA AAAGCAACCA AATCGAACGT GCACTTAAAT TAGACGTTGA TTTGTATAAC TCTGTTTTGA CACTGGAAGG TGCTGGCGAT GCTGAAAACT GCATCATCAA AGACCTTCAG CGTCATCCTG CAACTGGTTT TATCACGCAC ATCGATTTTC AACGTGCTTC TGATAAAGCA ATGGTTACTA AGCGTGTACC GCTTAAGTTC AAAGGCAAGG AATCTTCACC AGGTGTTAAA ATGGGTGGCT TGATGTCATT CATGCAAACA ACAGTTGAAG TTAGCTGTTT AGCGAAAGAC TTACCGACAG CAATCGATGT AGACGTTTCT GAACTAGAAG CGGGTACAAA CCTACGTTTG TCTCAGTTGA CGTTGCCTAA AGGTGTTAAG CTAACCGCTC TAACACACGG TAACACTGAC TACGACCAAG CGGTTGTTGG TATCAGTAAA GTTAAACGTT AA
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Protein sequence | MSQVWTAELR TEEGKGASRR LRHAGKVPAI IYGGDVDAKS IALKSNQIER ALKLDVDLYN SVLTLEGAGD AENCIIKDLQ RHPATGFITH IDFQRASDKA MVTKRVPLKF KGKESSPGVK MGGLMSFMQT TVEVSCLAKD LPTAIDVDVS ELEAGTNLRL SQLTLPKGVK LTALTHGNTD YDQAVVGISK VKR
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