Gene Tcr_0364 details

Gene Information

• Locus tag: Tcr_0364
• ID: 3762350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 412400
• End bp: 414286
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637785073
• Product: DNA topoisomerase IV subunit B
• Protein accession: YP_390634
• Protein GI: 78484709
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGAAA ACTATAATGC TTCCGAAATA GAGGTTTTAA CCGGATTGGA TCCAGTTCGA 
AAAAGGCCGG GGATGTATAC GGACACCACG CGCCCGAACC ATTTAGCGCA AGAAGTCATT 
GATAACAGTG TGGATGAAGC CATTGCGGGT CATGCCAGTA AAATCATCGT GACGCATTTT 
GCCGATGGTT CCATTGCTGT TGAAGATGAC GGTCGTGGGA TGCCTGTGGA TATTCATCCC 
GAACAGGGAA TGCCTGGGGT GGAAGTCATT TTAACGAAGC TTCACGCTGG GGGAAAATTC 
TCGAATAAGG CCTATCAATT TTCCGGTGGG TTGCATGGTG TCGGGATTTC TGTGGTTAAC 
GCATTATCCA AACGGGTTGA AATTCAAATC AAGCGAGACG GCAAAGTACA TCAAATTGCC 
TTTGAGCAAG GACTGGTGGT TGAGCCTCTG GAAGTGATTG GAAAAGTCGG TAAGAAAAAT 
ACCGGAACCA CATTGCGTTT TTGGCCGGAC GCACGTTTCT TTGATACCCC TAAATACGCA 
TTGACGAAAC TCAAACACTT GTTGCGTGCC AAAGCGGTCT TGAGTCCTGG GTTGCATGTT 
ACCTTTATCG ATGAAGTCAG TAACGAAACG TCTGAATGGC AGTATGAAGA TGGTCTAAGA 
GATTATTTAA ATCAAGCGTT GGATGGTGTG GATCGCGTTC CTGTTGAAGG ATTTGTCGGC 
GAAACCAATG GCGAAAATGA AGGCGTTGCC TGGGCCATTG CCTGGTTGGC AGAACCCGCT 
GATACAGTCT TGGAAAGTTA TGTGAACTTA ATCCCAACGC CTTTAGGCGG GACGCATGTT 
AACGGCCTTC GCGCCGGGGC GACGGATGCC ATTCGAGAGT TTTGTGAATT CCGCAATCTA 
TTACCGCGCG GGGTTAAAGT CACGCCTGAA GATGTCTGGC AAAATGTGGC GTTTGTGTTG 
TCTGCAAAAG TCAGAGAACC TCAGTTTGCC GGTCAGACCA AAGAGCGCTT GTCTTCTAGA 
GAATGTGTGC CCTTTATTTC CGGCGTGGTC AAAGACAGCT TAAGTTTGTG GTTAAACCAA 
CATACCGATG TGGCTGAAAA AATTGCCGAA ATAGTGATTA ACAACGCCCA TAATCGTAAT 
AAGAAAGCGA AAAAGATTAC CCGGAAAAAA ATCACATCGG GTCCGGCATT GCCTGGAAAG 
TTGGCCGACT GCACCGAATC GGATTTAAAT CGAACGGAAC TTTTCTTGGT GGAAGGGGAC 
TCCGCGGGCG GTTCCGCCAA GCAAGCGCGC GATAAAAATT TCCAGGCCAT CATGCCGTTA 
CGAGGCAAAA TCCTGAACAC CTGGGAAGTG GATTCGAGTC AGGTACTGGC CTCGTCCGAA 
ATTCATGATA TCAGTGTCGC AATAGGTGTG GATCCAGGGT CGGATGATTT AAGTGGACTG 
CGTTACGGTA AAATTTGTAT TCTGGCGGAT GCGGATTCGG ATGGCGCGCA CATTGCCACG 
TTAATTTGTG CTTTGTTTGT CAAACACTTT CCGAAATTGG TTGAGAACGG GCATGTCTAT 
GTGGCGATGC CGCCTTTATA TCGTATTGAT GTCGGCAAGC AGCTTTTCTA TGCATTGGAT 
GAATCTGAAC GGGCCGGTGT ATTGGATCGA ATTGAATCAG AAAAAATGCC TGGAAAAGTG 
CAAGTAACAC GATTCAAAGG GCTCGGTGAA ATGAACCCTA AACAGCTTCG TGAAACAACC 
ATGATGCCTG AAACCCGTCG ATTGATTCAG CTAGGGCTGG ACATCGAATC GGCTGATCCG 
ATGATGGATA AATTATTGGC GAAAAAGCGC TCAGGCGATC GCAAAATTTG GTTAGAAGAA 
AAAGGCGATT TAGCGGAAGT GGTTTAA 

 

Protein sequence

MSENYNASEI EVLTGLDPVR KRPGMYTDTT RPNHLAQEVI DNSVDEAIAG HASKIIVTHF 
ADGSIAVEDD GRGMPVDIHP EQGMPGVEVI LTKLHAGGKF SNKAYQFSGG LHGVGISVVN 
ALSKRVEIQI KRDGKVHQIA FEQGLVVEPL EVIGKVGKKN TGTTLRFWPD ARFFDTPKYA 
LTKLKHLLRA KAVLSPGLHV TFIDEVSNET SEWQYEDGLR DYLNQALDGV DRVPVEGFVG 
ETNGENEGVA WAIAWLAEPA DTVLESYVNL IPTPLGGTHV NGLRAGATDA IREFCEFRNL 
LPRGVKVTPE DVWQNVAFVL SAKVREPQFA GQTKERLSSR ECVPFISGVV KDSLSLWLNQ 
HTDVAEKIAE IVINNAHNRN KKAKKITRKK ITSGPALPGK LADCTESDLN RTELFLVEGD 
SAGGSAKQAR DKNFQAIMPL RGKILNTWEV DSSQVLASSE IHDISVAIGV DPGSDDLSGL 
RYGKICILAD ADSDGAHIAT LICALFVKHF PKLVENGHVY VAMPPLYRID VGKQLFYALD 
ESERAGVLDR IESEKMPGKV QVTRFKGLGE MNPKQLRETT MMPETRRLIQ LGLDIESADP 
MMDKLLAKKR SGDRKIWLEE KGDLAEVV