Gene Tcr_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0360 
Symbol 
ID3762346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp408349 
End bp409041 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content46% 
IMG OID637785069 
ProductOmpA/MotB 
Protein accessionYP_390630 
Protein GI78484705 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.87469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCT TGGCTTTAAA AGCTCGCTCG TCCTGGCTGT TTTCATTTGG TGATCTTGTG 
ACGTTGCTCA TCACCTTTTT TATTATGATG ATCGTTCTCA ATAAAGGCGA AATTTCACAA 
GTACAAAAAT GGGCCGAAAG TCAGTTGGAT ACTGCGTATG CTCAGCTGAC GACACAAATG 
GCCGATGCTG AGTATGTTTC TTTGTCTCGC ACCGCTAACG GGATTTCGGT GAACATTAGT 
CATCCAGAAG CGTTTGTGAA AGGCGGTTAT AACCTCTCTA GTGCGCTGGA GTCTGAATTG 
ACTCAACTTG GGAAAGCGTT ACAGTCATTG AAAATATTTC ACTTGGAGCG GTCAGATGTT 
CCCATTCATA TTTTGAGAAT TGCCGATGCG GATAGTTTAA GTTGGCGCTC AGAAGTGTCA 
GTGGCCGGTT ATACCGATGA TGATCAAATT GATCCGCAGT CGCCCTTAAG AAATAATTGG 
TTTCTAAGTA CGATGCGTGC TCAGAACGTG ATGAAGAGTC TGTATCAGTC AAGTGAGTTG 
AAGCAGTCCC AGTTTGGGGT AACGGGGTAT GGGAAATATC GCCCTGTTGC ATCGAATGAA 
ACCCGTGAGG GCAAAGCCAA AAACAGGCGC GTTCAGGTGA TGATTTCGGC GACCTTTGAA 
AAGTCGGCCA CCCAGCCGGC ATGGTTTAAA TAG
 
Protein sequence
MSALALKARS SWLFSFGDLV TLLITFFIMM IVLNKGEISQ VQKWAESQLD TAYAQLTTQM 
ADAEYVSLSR TANGISVNIS HPEAFVKGGY NLSSALESEL TQLGKALQSL KIFHLERSDV 
PIHILRIADA DSLSWRSEVS VAGYTDDDQI DPQSPLRNNW FLSTMRAQNV MKSLYQSSEL 
KQSQFGVTGY GKYRPVASNE TREGKAKNRR VQVMISATFE KSATQPAWFK