Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0340 |
Symbol | |
ID | 3762365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 389179 |
End bp | 390144 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637785049 |
Product | trans-hexaprenyltranstransferase |
Protein accession | YP_390610 |
Protein GI | 78484685 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000104163 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTTT CACAGATTCG AAAACTTATT CAGGATGACA TTGAGGCGAC TGACCAATTG ATTCTGTCTA AACTGTCTTC CGATGTTGTT CTTATTAATC AAATTGGCCA CTACATTATC AACAGTGGTG GAAAGCGTTT ACGCCCTTTA CTGGTCTTAT TGTCCGCTCA CGCCTGTGAC TACAAAGGAA AAGACCACTT AACGTTGGCG GCCGTGATTG AATTCATTCA CACATCCACC TTACTACATG ACGATGTCGT CGATGAATCA GAAACTCGAC GCGGCAATCA GACGGCCAAT GAAGTCTGGG GAAATGCCGC CAGTGTACTG GTCGGTGATT TCTTATACTC ACGCTCATTC GAAATGATGG TGGAACCTGG AATTATGCGC GTCATGGAAG TGATGTCTGA AACCACGAAT GTGATTGCAG AAGGTGAAGT CCTCCAATTA CTCAACTGCC ATGACGCCGA CACCACGAGT CAGCGCTACA TGGAAGTCAT TCACCGAAAA ACCGCCAAAC TGTTTGAAGC CGCCACTTTA TTAGGGCCTA TCCTGGGTAA AAAACCCGAA CTAGAATCGG CTTTTTCATC CTATGGTCGC CACCTTGGTG CCGCCTTCCA ACTCATCGAT GATGCACTAG ATTACACGGC CGATGCCGAT GAACTTGGTA AAAACCTAGG AGACGATCTG GCCGAAGGGA AACCTACTCT GCCTTTAATC TATGTACTTG AAAATGGAAC CGAAAACGAA AAGTCATTGA TTCGTAAAGC CATTGAAACC GAAGGCATTA AATTATTGAA AGAAGTCACT TCCATCATTC AAACATCCGG TGCCATTCAA TACACTCAAG AAGTTGCGAC GCAAGAAGCT GAAAAAGCTA AAGCCGCTCT CGCTCCGCTG AACGATTCTG AGATTAAACA AGCGTTATTA TCTTTGGCAG ACTTAGCGGT TCAAAGAAAC CACTAA
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Protein sequence | MTLSQIRKLI QDDIEATDQL ILSKLSSDVV LINQIGHYII NSGGKRLRPL LVLLSAHACD YKGKDHLTLA AVIEFIHTST LLHDDVVDES ETRRGNQTAN EVWGNAASVL VGDFLYSRSF EMMVEPGIMR VMEVMSETTN VIAEGEVLQL LNCHDADTTS QRYMEVIHRK TAKLFEAATL LGPILGKKPE LESAFSSYGR HLGAAFQLID DALDYTADAD ELGKNLGDDL AEGKPTLPLI YVLENGTENE KSLIRKAIET EGIKLLKEVT SIIQTSGAIQ YTQEVATQEA EKAKAALAPL NDSEIKQALL SLADLAVQRN H
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