Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0336 |
Symbol | |
ID | 3762361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 381465 |
End bp | 383582 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637785045 |
Product | hypothetical protein |
Protein accession | YP_390606 |
Protein GI | 78484681 |
COG category | [S] Function unknown |
COG ID | [COG3472] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTCG AGCAACCAAA ACCTGATTCA AAGAAATATG TTGACCTTAT TAATGAGATT CAAAAAGGAA TCATTAAAAT TCCTAAATTT CAGCGTAATT TTGTTTGGAC GATCGACAAG ACAGCCAAGC TTTTAGATAG TATTTTAAAA GGTTACCCGA TTGGTACATT TATTCTATGG CAAACGGATG AGCGCATCAA TGATATCAAG AATGTCGGTA ATCTGGATAT TCCTCACACT CCTGAGGGTG TGAAGGTGCA GTATGTGCTT GATGGACAGC AGCGCATTAC TTCACTATTT GCAGCCTACC TGGGTGCACA CATCCAGAAA GTTGGTGAGA AGAAAACCGT CGACTACAGC AGCATCGTTG TAAACCTAGG TGCCGACATT AATGACAACG ATGAGCAAGT TATCACCGCG GAACCGACTG GTGACAACTA TATTTCTTTG TCAGACGTAT TAAATTTCAT GGACAGGATG ACGGATATAA AAGACCGTTT TTCTGATCAG GATTTTAAGA AGATTCATTC TTATTCTAGA GCTTTTGATA CTTATGATTT TTCAACCGTT ATTCTTAGAA AAGAAGATAT CGATTCAGCA ATTGAAGTGT TCACTCGCAT CAATACAGGC GGTCAAACCC TGACACTATT CGAAATTATG TCAGCCAAGA CTTATGACGA ACAACAGCAG TTCGATATGC AGGTGAAATG GGAAAATTTC ATTAAAGAAC TGAAAGAGAT CAAATATGAA GGAGTGTCAA GCAGTGTGGT ACTTAGCCTT TTGGCTCTGC TGTTAAGTCG TACTAAGGAA TGTAAACGCA AAACCATTCT GTCACTTGAT AAGCAAAATA TTATTGATAG TTGGGATGGT GTGGTTTCTG CATTAAAAGA TAGTGTTGAT TATTTTAGAA CCACTTATCG TATCCCTGTA TCTCAGTTAT TACCCTACGA TTCGTTGCTT GTTCCATTTT CTTATTTCTT TTACCAGAAT AAAGATAAGC CGAATGCGGA TCAGCGTAAG TACCTGGAAG AGTTTTTCTG GCGTGTATCA CTTTCTTCTC GTTATTCTAG TTCTACTGAA TCAAAGCTTG CACAGGATAT TAAACGCATT GACCAGATTC TTAAAGGACA GCGACCTGAT TACAACGATA TTAAAGTCAA CTTGGACTCT CCACAGTCAT TGATTGATAC CAATTTCAGC GCAGGTAACA GCTACTGCAA AGCAGTTTTG TGTTTATTGG CTTACCAGGA GCCTAAGGAT TTTCAGGATA ACGGTAAAGT TATTCTTGAT AATTCATGGC TCAAAGTTGC CAATAGCAAG AATTATCACC ATTTCTTTCC TAAGGCCTAT TTGAAAAATA GAACCGTGCT AAATGGCAAT AGTGTGATTA ACATCACTTT TGTCAGTGAT CATCTAAATA AACGTAAAAT TGGTGCCAAA GCACCTTCAC AATACATGGC AGACTTTCAG GACGAAAATA GTCAGGTTAA TAAGGCCTTA CAGAGCCATT TGATTGATTT GGATGGTTTT GGTATTGAAA GTAATGATTA TGACACATTT TTGCAAGCAC GAGCCAAACT GATATACGAG GAGCTTCGCT CACGTATTGA TCTTAGTCAC AAGGAACCAG TTAATGAAGA AGTGCAAGAA CTAATTCTGG CTGGAGAAAG TGATACAGTT GAATTCAAGT CGACCTTACG TTACGACTTG CGCACAAAAG AAGTCAATAA AAAGCTGGAA TATGTTATCG GTAAAACTAT TGCCGCTTTT ATGAATAGTG ACGGTGGGAA CCTATTTATC GGTGTGGATG ATAATCAGAA CATGCTGGGG TTGATCGATG ATATTTCTAC CTTATCAAAA CCAAATATAG ATGGTTTCGA GTTGCACTTA ATCGAGATCA TCAAAAAATA TATCGGTGCA GGGTTGATGG CTCATATCAA AATCAGTTTT CCCGAAGTGG AAGGCACTCA GATATGTCGA ATTAAAATTT CTAAAAGTAG CAAACCTGTA TTTACTCAAT ACGAAGGCAG AGAAGACTTC TTTATTCGAA GTGGTTGCTC ATCACAACCA TTGAGCCGTG AAGATCAAAG TGCTTATGAA AGGTCACATT GGAACTGA
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Protein sequence | MSFEQPKPDS KKYVDLINEI QKGIIKIPKF QRNFVWTIDK TAKLLDSILK GYPIGTFILW QTDERINDIK NVGNLDIPHT PEGVKVQYVL DGQQRITSLF AAYLGAHIQK VGEKKTVDYS SIVVNLGADI NDNDEQVITA EPTGDNYISL SDVLNFMDRM TDIKDRFSDQ DFKKIHSYSR AFDTYDFSTV ILRKEDIDSA IEVFTRINTG GQTLTLFEIM SAKTYDEQQQ FDMQVKWENF IKELKEIKYE GVSSSVVLSL LALLLSRTKE CKRKTILSLD KQNIIDSWDG VVSALKDSVD YFRTTYRIPV SQLLPYDSLL VPFSYFFYQN KDKPNADQRK YLEEFFWRVS LSSRYSSSTE SKLAQDIKRI DQILKGQRPD YNDIKVNLDS PQSLIDTNFS AGNSYCKAVL CLLAYQEPKD FQDNGKVILD NSWLKVANSK NYHHFFPKAY LKNRTVLNGN SVINITFVSD HLNKRKIGAK APSQYMADFQ DENSQVNKAL QSHLIDLDGF GIESNDYDTF LQARAKLIYE ELRSRIDLSH KEPVNEEVQE LILAGESDTV EFKSTLRYDL RTKEVNKKLE YVIGKTIAAF MNSDGGNLFI GVDDNQNMLG LIDDISTLSK PNIDGFELHL IEIIKKYIGA GLMAHIKISF PEVEGTQICR IKISKSSKPV FTQYEGREDF FIRSGCSSQP LSREDQSAYE RSHWN
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