Gene Tcr_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0336 
Symbol 
ID3762361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp381465 
End bp383582 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content38% 
IMG OID637785045 
Producthypothetical protein 
Protein accessionYP_390606 
Protein GI78484681 
COG category[S] Function unknown 
COG ID[COG3472] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCG AGCAACCAAA ACCTGATTCA AAGAAATATG TTGACCTTAT TAATGAGATT 
CAAAAAGGAA TCATTAAAAT TCCTAAATTT CAGCGTAATT TTGTTTGGAC GATCGACAAG
ACAGCCAAGC TTTTAGATAG TATTTTAAAA GGTTACCCGA TTGGTACATT TATTCTATGG
CAAACGGATG AGCGCATCAA TGATATCAAG AATGTCGGTA ATCTGGATAT TCCTCACACT
CCTGAGGGTG TGAAGGTGCA GTATGTGCTT GATGGACAGC AGCGCATTAC TTCACTATTT
GCAGCCTACC TGGGTGCACA CATCCAGAAA GTTGGTGAGA AGAAAACCGT CGACTACAGC
AGCATCGTTG TAAACCTAGG TGCCGACATT AATGACAACG ATGAGCAAGT TATCACCGCG
GAACCGACTG GTGACAACTA TATTTCTTTG TCAGACGTAT TAAATTTCAT GGACAGGATG
ACGGATATAA AAGACCGTTT TTCTGATCAG GATTTTAAGA AGATTCATTC TTATTCTAGA
GCTTTTGATA CTTATGATTT TTCAACCGTT ATTCTTAGAA AAGAAGATAT CGATTCAGCA
ATTGAAGTGT TCACTCGCAT CAATACAGGC GGTCAAACCC TGACACTATT CGAAATTATG
TCAGCCAAGA CTTATGACGA ACAACAGCAG TTCGATATGC AGGTGAAATG GGAAAATTTC
ATTAAAGAAC TGAAAGAGAT CAAATATGAA GGAGTGTCAA GCAGTGTGGT ACTTAGCCTT
TTGGCTCTGC TGTTAAGTCG TACTAAGGAA TGTAAACGCA AAACCATTCT GTCACTTGAT
AAGCAAAATA TTATTGATAG TTGGGATGGT GTGGTTTCTG CATTAAAAGA TAGTGTTGAT
TATTTTAGAA CCACTTATCG TATCCCTGTA TCTCAGTTAT TACCCTACGA TTCGTTGCTT
GTTCCATTTT CTTATTTCTT TTACCAGAAT AAAGATAAGC CGAATGCGGA TCAGCGTAAG
TACCTGGAAG AGTTTTTCTG GCGTGTATCA CTTTCTTCTC GTTATTCTAG TTCTACTGAA
TCAAAGCTTG CACAGGATAT TAAACGCATT GACCAGATTC TTAAAGGACA GCGACCTGAT
TACAACGATA TTAAAGTCAA CTTGGACTCT CCACAGTCAT TGATTGATAC CAATTTCAGC
GCAGGTAACA GCTACTGCAA AGCAGTTTTG TGTTTATTGG CTTACCAGGA GCCTAAGGAT
TTTCAGGATA ACGGTAAAGT TATTCTTGAT AATTCATGGC TCAAAGTTGC CAATAGCAAG
AATTATCACC ATTTCTTTCC TAAGGCCTAT TTGAAAAATA GAACCGTGCT AAATGGCAAT
AGTGTGATTA ACATCACTTT TGTCAGTGAT CATCTAAATA AACGTAAAAT TGGTGCCAAA
GCACCTTCAC AATACATGGC AGACTTTCAG GACGAAAATA GTCAGGTTAA TAAGGCCTTA
CAGAGCCATT TGATTGATTT GGATGGTTTT GGTATTGAAA GTAATGATTA TGACACATTT
TTGCAAGCAC GAGCCAAACT GATATACGAG GAGCTTCGCT CACGTATTGA TCTTAGTCAC
AAGGAACCAG TTAATGAAGA AGTGCAAGAA CTAATTCTGG CTGGAGAAAG TGATACAGTT
GAATTCAAGT CGACCTTACG TTACGACTTG CGCACAAAAG AAGTCAATAA AAAGCTGGAA
TATGTTATCG GTAAAACTAT TGCCGCTTTT ATGAATAGTG ACGGTGGGAA CCTATTTATC
GGTGTGGATG ATAATCAGAA CATGCTGGGG TTGATCGATG ATATTTCTAC CTTATCAAAA
CCAAATATAG ATGGTTTCGA GTTGCACTTA ATCGAGATCA TCAAAAAATA TATCGGTGCA
GGGTTGATGG CTCATATCAA AATCAGTTTT CCCGAAGTGG AAGGCACTCA GATATGTCGA
ATTAAAATTT CTAAAAGTAG CAAACCTGTA TTTACTCAAT ACGAAGGCAG AGAAGACTTC
TTTATTCGAA GTGGTTGCTC ATCACAACCA TTGAGCCGTG AAGATCAAAG TGCTTATGAA
AGGTCACATT GGAACTGA
 
Protein sequence
MSFEQPKPDS KKYVDLINEI QKGIIKIPKF QRNFVWTIDK TAKLLDSILK GYPIGTFILW 
QTDERINDIK NVGNLDIPHT PEGVKVQYVL DGQQRITSLF AAYLGAHIQK VGEKKTVDYS
SIVVNLGADI NDNDEQVITA EPTGDNYISL SDVLNFMDRM TDIKDRFSDQ DFKKIHSYSR
AFDTYDFSTV ILRKEDIDSA IEVFTRINTG GQTLTLFEIM SAKTYDEQQQ FDMQVKWENF
IKELKEIKYE GVSSSVVLSL LALLLSRTKE CKRKTILSLD KQNIIDSWDG VVSALKDSVD
YFRTTYRIPV SQLLPYDSLL VPFSYFFYQN KDKPNADQRK YLEEFFWRVS LSSRYSSSTE
SKLAQDIKRI DQILKGQRPD YNDIKVNLDS PQSLIDTNFS AGNSYCKAVL CLLAYQEPKD
FQDNGKVILD NSWLKVANSK NYHHFFPKAY LKNRTVLNGN SVINITFVSD HLNKRKIGAK
APSQYMADFQ DENSQVNKAL QSHLIDLDGF GIESNDYDTF LQARAKLIYE ELRSRIDLSH
KEPVNEEVQE LILAGESDTV EFKSTLRYDL RTKEVNKKLE YVIGKTIAAF MNSDGGNLFI
GVDDNQNMLG LIDDISTLSK PNIDGFELHL IEIIKKYIGA GLMAHIKISF PEVEGTQICR
IKISKSSKPV FTQYEGREDF FIRSGCSSQP LSREDQSAYE RSHWN