Gene Tcr_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0333 
Symbol 
ID3762358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp375652 
End bp376767 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content37% 
IMG OID637785042 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_390603 
Protein GI78484678 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTAA AGGTAATTGA ACTTTCAAAA GCATTAAATT TGAAAAATGG TAAAGCTCTA 
AAAAACACCA GCAATGGTAT TTATCAGATA TTTGGATCAA ATGGAGTTAT CGGAACTACA
GAGTTAAATA ATAATGAAAA TGCCTTAATT ATAGGGCGTG TTGGGGCGTA CTGTGGATCA
ATAGAATTGT CTCAAGAAAA GTTCTGGGCA TCTGATAATA CGATTGTTGC AGAGCCTAAA
CCAGATAATG TACTTCATTA CTGGTATTAC AGACTAAAGT CTTTTCCACT TAGGAAGTTT
GCAGGTGGTG CCGCTCAACC CTTGCTTACA CAAAATACGT TAAAGCCTCT AAAAATAGCC
GCACACACAG ACTATTTAGA GCAAGATAAA ATTGCAAACA TTTTGAAGGT ATACGACGAT
CTAATCGAAA ACAATAACCG GCGGATTGCT TTATTGGAGG AGTCGGCTCG GTTGTTGTAT
CAAGAGTGGT TTGTTCACCT ACGCTTTCCC GGCCACGAGC ACTGCAAAAT TATTGATGGT
GTTCCTGAGG GATGGGAGAG GACTAGATTA GAGGATCTTA TTGAAGAGAT TAAAGAAGCT
GTTAACCCAG AAAGTATTGA TTCCGAAACA CCTTATATCG GGCTTGAGCA TATGCCAAGA
AGATCAATTA CGCTTTCTGA ATGGGAAACA GTTGAAAAAG TAACGAGTAA AAAATATAGG
TATTATTCAG GCGACATTAT TTTTGGGAAA ATAAGGCCTT ATTTTCATAA GGTAGGTTTT
GCAATTACAG ATGGAGTCAC TTCATCTGAT GCGGTAGTCG TACGCTCAAA AGATATTTCG
AATTATCAAT ATTTACTCAT GTATCTTTCG AGTGATTTTT TTATTTCTTT GGCCTCAAAG
ACTGTCAAGG AAGGGTCAAA AATGCCAAGG GCAGACTGGA AGTATTTAAT GACTACAGAT
GTACAAGTGC CATCAGACTT TTTGTTAAAA AGCTTCAGTG ATTCTGTTGA TAAAATTTTG
AAACAACTAA AAACTCTTTC TGTTCAAAAT AAACAACTTA AAAAAGCCCG CGACATCTTA
TTACCCCGCC TAATGAATGG AGAGATTGTG GTATGA
 
Protein sequence
MSLKVIELSK ALNLKNGKAL KNTSNGIYQI FGSNGVIGTT ELNNNENALI IGRVGAYCGS 
IELSQEKFWA SDNTIVAEPK PDNVLHYWYY RLKSFPLRKF AGGAAQPLLT QNTLKPLKIA
AHTDYLEQDK IANILKVYDD LIENNNRRIA LLEESARLLY QEWFVHLRFP GHEHCKIIDG
VPEGWERTRL EDLIEEIKEA VNPESIDSET PYIGLEHMPR RSITLSEWET VEKVTSKKYR
YYSGDIIFGK IRPYFHKVGF AITDGVTSSD AVVVRSKDIS NYQYLLMYLS SDFFISLASK
TVKEGSKMPR ADWKYLMTTD VQVPSDFLLK SFSDSVDKIL KQLKTLSVQN KQLKKARDIL
LPRLMNGEIV V