Gene Tcr_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0322 
Symbol 
ID3762544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp360690 
End bp361412 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content45% 
IMG OID637785031 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_390592 
Protein GI78484667 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCCAC TTTTTGAAAG AAGTTTACTG GTGTTTGAAG AACAAGGCAT TAAACAGCTT 
CAAAATTCTC ATGTGCTCGT TGCAGGGGTT GGTGGTGTCG GTGGGTTTGT CATTGAAGCA
CTGGCACGAG CAGGGGTAGG GAAAATGACC ATTGTGGATC ATGACAGTGT TTCCCCTTCG
AATTTAAACC GTCAGATTAT CGCGCTTGAG TCGACGTTGG GGCAAAACAA GGCCGAAGTG
ATGAAACAAC GTATTTATGA TATTAATCCG GCATGTGAGG TGGTAACGAT TCAATCCTTT
TTGAAGCCTG ATGATATGAA TGAACTTCTT GCAGACGATT TTAATTATGT CGTTGATGCG
ATAGACAGTC TTAATTGTAA AGTAGCATTG GTTGCAACCG CCTATCAGAG GGGTTTAAAA
GTGGTTTCCA GTATGGGAGC CGGTCGCCGG ATTGACCCAA GTAAAATCCT GATCGAAGAT
ATCTCAAAAA CCCATACTTG TGGTTTGGCG CGCAATATGC GTCAGCGGTT GAAAAAACAA
CGAATTGCAA AAGGTGTGCC GGTCATATTT TCGACAGAAC TCCCAAAAGC GCCGGGTCCT
ATGGAAGAAA TTGAAGGCGC GAGAGGGCGG GTTGTGAATG GAACAGCCAG TTATATGCCA
GGTATTTTTG GGCTTATGCT CGCGGGCTTG GTGATTCAGG ATCTGGCCAA GACAGACTCT
TAA
 
Protein sequence
MSPLFERSLL VFEEQGIKQL QNSHVLVAGV GGVGGFVIEA LARAGVGKMT IVDHDSVSPS 
NLNRQIIALE STLGQNKAEV MKQRIYDINP ACEVVTIQSF LKPDDMNELL ADDFNYVVDA
IDSLNCKVAL VATAYQRGLK VVSSMGAGRR IDPSKILIED ISKTHTCGLA RNMRQRLKKQ
RIAKGVPVIF STELPKAPGP MEEIEGARGR VVNGTASYMP GIFGLMLAGL VIQDLAKTDS