Gene Tcr_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0312 
Symbol 
ID3762534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp354524 
End bp355033 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content42% 
IMG OID637785021 
Productribosomal protein S5 
Protein accessionYP_390582 
Protein GI78484657 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00213866 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCAA AGGAATTACA AGAAGGTCAA GATGGTCTTG TTGAAAAATT AGTCTCTGTC 
CGCCGTGTCG CAAAAGTTGT GAAAGGTGGT CGAGTGTTTG GTTTTTCTGC TTTAACTGTT
GTTGGTGACG GTGAAGGTCG TGTTGGCTAT GGAAGTGGTA AGGCGAATGA AGTTCCTGTT
GCCATTAAAA AAGCAATGGA AAAAGCTCGT CGTAATATGA AAGATGTTCA CCTAGATGGT
GGTACATTGC AGTATCCTAT TAACTTTAAA CAAGGTGCTG CCAATATCGT GATGTTACCT
GCCTCTGATG GTACGGGAAT CATTGCGGGT GGTGCGATGC GCGCAGTATT AGAAGCAGCT
GGTGTAAAAG ACGTATTAGC AAAGTGTGTT GGTACAACTC GTCCAGTAAA CGTTGTTCGT
TCAACCGTTA ATGCTTTGAC AGGAATGAGT AGCCCAGAAC TGATTGCTGC AAAACGTGGT
AAATCAGTTG AAGAAATTTT AGGTGAATAA
 
Protein sequence
MSSKELQEGQ DGLVEKLVSV RRVAKVVKGG RVFGFSALTV VGDGEGRVGY GSGKANEVPV 
AIKKAMEKAR RNMKDVHLDG GTLQYPINFK QGAANIVMLP ASDGTGIIAG GAMRAVLEAA
GVKDVLAKCV GTTRPVNVVR STVNALTGMS SPELIAAKRG KSVEEILGE