Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0274 |
Symbol | |
ID | 3761444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 321496 |
End bp | 322692 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637784979 |
Product | ornithine decarboxylase |
Protein accession | YP_390544 |
Protein GI | 78484619 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000805907 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATACAG CAGAACTCGT CCAACATTTT GCAGAACAGA CGCACCCGGA TGAACTTGAG CAGTTTGACC GCTCAACCTT AAGGGACTTG CTGACACAGC ATGAAACGCC TTTTCTGGTT TTGGATTTGC AAGAAGTGGA ATACCAGTAC AGTGCTTTGC AAAAAGCGTT GCCTGGGGTT GAGTTATTTT ATGCCATTAA GTCACTCGCG CACCCTGCCG TTATTCGCCG GTTGAAAAAA CTGGGCGGCA GTTTTGATTT GGCCACGTCA GGAGAAGTTG ACTTGGTAAA AGGGTTAGGC ATTGAAGGGC ATCAATGTAT TCATACGCAT CCGATTAAAA AAGATCGTGA GATTCGTCAT GCATTGGATT TCGGTTGCAC CCGTTTTGTG GTGGACAACC CGGATGAAGT GCTGAAGTTT ATTCCGTACA AAGATGAAGT GGAATTGATG ATTCGTGTCA GTTTCCGCAG CCAGGATGCC ATTGTCGATT TATCCCGTAA GTTTGGTTCG GCCTTGGAAG AATTGCCAGG CCTGGTCAAT TTAGCGATGG AAAATGGGTT AACCGTGTCA GGCTTGTCCT TCCATGTAGG ATCGCAATCT TTGTCGCCTT TTGCCCAAGT GAACGCGGTG CAAGCTTCGA TTTCGGCCAT GAAAGAAATG TCGCATGTTC ATTGGAAATG GCTGGACATC GGAGGAAGTT TTCCGGTCTC TTATCAAGGC CCTGTCATGC CGATCGAAGA TTTTTGTGCG CCAATTATGG AAGCATTAAC CGAATTGCCA GCTTCCGTGA AAGTGTTTGC GGAACCGGGT CGATTCATTT CAGCTCCTTC GATGATTGAA GTCATTCGAG TGGTGGGGAA AGCGAAACGT GGCGCTCGAA CTTGGTATTA TCTGGACGAT GGCGTTTATG GGGCGTTGAG TGGTCAAATG TATGATCATG CTAAGTATCC GATTGCACCT TTAAAACCAG TTGATCCGAC AGGGGATTTT TATCCGAGTG TGTTGGCTGG GCCGACGTGT GACAGTGTGG ATGTGGTGGA TGAAGACATT GAGCTGCCGG AATTAGCGGT GGGTGATATT TTGATTGCGA AACAAATGGG CGCCTATACC ATTGCGTCTG CTTCGGAATT TAACTATTAT CCTAAGCCTA AGATAGTGGT GGTCGAAGAT TTAATTGACC ATACGGATGA TGAATAG
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Protein sequence | MNTAELVQHF AEQTHPDELE QFDRSTLRDL LTQHETPFLV LDLQEVEYQY SALQKALPGV ELFYAIKSLA HPAVIRRLKK LGGSFDLATS GEVDLVKGLG IEGHQCIHTH PIKKDREIRH ALDFGCTRFV VDNPDEVLKF IPYKDEVELM IRVSFRSQDA IVDLSRKFGS ALEELPGLVN LAMENGLTVS GLSFHVGSQS LSPFAQVNAV QASISAMKEM SHVHWKWLDI GGSFPVSYQG PVMPIEDFCA PIMEALTELP ASVKVFAEPG RFISAPSMIE VIRVVGKAKR GARTWYYLDD GVYGALSGQM YDHAKYPIAP LKPVDPTGDF YPSVLAGPTC DSVDVVDEDI ELPELAVGDI LIAKQMGAYT IASASEFNYY PKPKIVVVED LIDHTDDE
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