Gene Tcr_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0214 
Symbol 
ID3761653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp254317 
End bp255237 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID637784919 
Productimport inner membrane translocase, subunit Tim44 
Protein accessionYP_390484 
Protein GI78484559 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.525387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAACACTTTG GTTCTCGATG ATGGCATTTA CGTTTTTTGC AACCATGCAG 
GTGGCAGAAG CCAAGCGTTT TGGTGGCGGA GGCAGTTTTG GTTATTCAAA GCAAATCGCG
CCTAAAAAAT TCAATAGCAC CAAACCCAGC TCAAAAACTG ATGCGGCCAG TGCGAAAAAC
AATACCACTG CGGCGGGCGC CAGAACGTCT GGTGCCTCTC GATTTTTAGG GCCTTTGGCC
GGTATTGCCG CGGGTGGTTT ATTGGCCGCG ATGCTGTTTG GAGATGGGTT TGATGGAATT
CAATTATTGG ATATTTTATT GATCGCATTG GTCGCCTTTT TGTTATTCAG CTTTTTGAAA
AAACGCCAGG CAACGATGAT GCAACCGGCT TATTCACGTG AATCATCACC GTCCTCTTTC
GAAGCGGCAT CGCGTCAAAC GACGACGCAA ATGCGTGAAA ATCATGCGCC AACTTATGAC
CCATATGCCA GTGGGAGCCT GATCGGTTCT GGCTTGTCAG AGCAAGCAGA GTCGATGACG
CAAAAACCAG ATTGGTTTGA TGAAGCCGGT TTTATGGAAG CCGCAAAAGG GCATTTCGTC
GAAATACAGA AAGCATGGGA TGCATTGGAC TCTCAAGAGT TGGCGGATTA TTGCACGCCG
GAACTGATGG CGGCATTGCA ATCTGAGATG GATACTTTTC AAGCAGGAGA AAACCTTACT
GAAGTGGAAG AACTGAATGC CGAAACGGTG GAGATGGCGA TTGATGGCGA TTATTTTATT
GTCAGCGTGC GCTTCAATGG GTTTATTAGA GAAGACCGTA ATGACGTGGC TCATGCCTTT
AATGAAATCT GGCATATTCG TCGTTTAGCC GCCGGCGAAG GTAATTGGCA GATTGCGGGC
ATTCAACAAA ATCAGGTTTG A
 
Protein sequence
MKKITLWFSM MAFTFFATMQ VAEAKRFGGG GSFGYSKQIA PKKFNSTKPS SKTDAASAKN 
NTTAAGARTS GASRFLGPLA GIAAGGLLAA MLFGDGFDGI QLLDILLIAL VAFLLFSFLK
KRQATMMQPA YSRESSPSSF EAASRQTTTQ MRENHAPTYD PYASGSLIGS GLSEQAESMT
QKPDWFDEAG FMEAAKGHFV EIQKAWDALD SQELADYCTP ELMAALQSEM DTFQAGENLT
EVEELNAETV EMAIDGDYFI VSVRFNGFIR EDRNDVAHAF NEIWHIRRLA AGEGNWQIAG
IQQNQV