Gene Tcr_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0210 
Symbol 
ID3761649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp249189 
End bp250133 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content45% 
IMG OID637784915 
ProductOmpA/MotB 
Protein accessionYP_390480 
Protein GI78484555 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTCT CTTTATTCCT TTGCACTCTA ACCGTCTCTT TATCGAGTTT TCACGCCTCA 
TCTCTTTTTG CTCAACCCCC CACTCCACCG TCCTCTTTTA CGGCTGAAAA AACCCTACTT
GAAAAGGCAC CGACACCAGA AAAACTTTCC AGCTTGTATC GAGACCTAGA TCAAGATGGC
GTGGTAGATA AACAAGATCA TTGTTTAAAC AGCTTACCGA ACCAACCGGT GAATGCTTTT
GGGTGTGAAG CAGACGAAGA TCACGATGGG GTCGTGGACC GATTGGATCA ATGTCATAAA
ACGCCCATCG GTATCAGTGT CAACGAGGTC GGCTGTGAAG GCGATGCTGA CTTGGATGGT
ATCATTGACT CTTTAGATCA GTGTCCAGGC ACTCTGCCAG GGGTGGTCGT CAACAAAGCT
GGCTGCCGCC TTGATACCGA TCTTGATAGA GACGGTGTTT TAAACAACAA GGATCAATGC
CCTAACACCC CGATCGGTGT GACGGTTAAC CAATACGGTT GCGAACCTAA AAGCTTAGTG
GTGACAAATA TCGTGTTTGA TTTGGGATCG TATAAAATTC GTCCGGATCA AAAGCCCATT
TTGGATAAAG ACATCAGCCA ATTACGAAGT CTTAAAGACC ATGAACGCAT TGTCATTACT
GGCTTTACTG ATTCCTTGGG CAGTGAATCC AGTAATTTGA AATTGTCTTG GAATCGCGCG
CAAGCCACCA AAGATTACCT TGTTCGGAAG TTTAAGTACG ACCCTGCCTC TATTTTGGTG
CTTGGCAAAG GCGAAGCCAA TCCCGTTGCA ACAAATAAAA CCAAAGAAGG ACGAAAACAA
AATCGACGTA TTTCTTTTAT GATAATGGAC CAACAGATAG TGCCCAATGA AGCACTTGCG
GCCTTACCAG ACGACATGAA ACACTATAAC CGCTATCAAG AATAA
 
Protein sequence
MRFSLFLCTL TVSLSSFHAS SLFAQPPTPP SSFTAEKTLL EKAPTPEKLS SLYRDLDQDG 
VVDKQDHCLN SLPNQPVNAF GCEADEDHDG VVDRLDQCHK TPIGISVNEV GCEGDADLDG
IIDSLDQCPG TLPGVVVNKA GCRLDTDLDR DGVLNNKDQC PNTPIGVTVN QYGCEPKSLV
VTNIVFDLGS YKIRPDQKPI LDKDISQLRS LKDHERIVIT GFTDSLGSES SNLKLSWNRA
QATKDYLVRK FKYDPASILV LGKGEANPVA TNKTKEGRKQ NRRISFMIMD QQIVPNEALA
ALPDDMKHYN RYQE