Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0207 |
Symbol | |
ID | 3761646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 244236 |
End bp | 246440 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637784912 |
Product | ABC transporter related |
Protein accession | YP_390477 |
Protein GI | 78484552 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACG ACCAAGCCTC TGCTGCCCGC CAAAACGAAG AGACTCACAC AGACACTTCT GCAGTAGACC TAGGACAACC GGTGATCGAT TTTAAGGATC CTCTATTGGA TTGCTTGGTA ATCTACACCA AGCTCAATCG ACACCCCTTT TCCAAAGATG CCTTAATATC AGGGTTGCCT TTAGCAAACC ATGACCGCTT AACGCCTGAA TTATTCATTC GCGCCGCTGA CCGCGCCAAC ATTGTCGCCA GCTTTAAAAA ACGCGCGTTA AAAGACATTC CTAACCTGGT AATGCCGTGC ATCCTGACAC TGAAAAACAA CCGGGCCTGC CTGTTAGAAA AAATAGACCT CGATGCCGAA AAAGCGACCG TGGTCTTATC GGATGCCCCG GATGGTCGAC TCGAGGTCGA CTTAAAGCAA CTGGAAGAAG ACTATCTGGG CTATGCCATT TACTTTACTG AAAAATTTCA ACAGGCTTCT AAAAAAGAAG ACCTGATCTC CACCGGCCAG GGACACTGGT TTTGGCATAC CTTCTGGGAC AACCGCGGTA TTTACCGCGA CGTCTTAATC GCCTCGGTGA TTATCAATAT TTTTGTACTG GCAAACCCTC TGTTTGTGAT GAACGTTTAT GATCGCATTG TGCCGAATAA TGCCGTCGAA TCCCTTTGGG TTCTGGCAAT CGGCATCAGT GTCGTTTATA TGTTCGATAT TCTGCTGAAG TTTCTTCGTT CTTATTTCCT AGAAATGGCC GGCAAAAAAA GTGATGTCAT CATGTCTTCC AAGCTCTTTG AACAGACTCT TGGGCTGACC ATGGCCAATC GTCATGGTTC TATCGGAGCC TTTGCCAACA ACTTAAAAGA ATTCGACAGT ATTCGGAACT TCTTTACCTC CGGCACCATT GCTTCTTTAG TGGATTTACC GTTTGTCGTT ATCTTCTTAC TGGTTATTTT CTTTATTGCA GGTCAAATCG TATTGGTTCC GATCGCCATT ATCGGCTTGA TACTGATGTA TAGCATTCTC ATGAAAAAGC CGATTCAAAG CAGTGTAGAA GCCACTTATG AAGCGTCTTC ACAGAAAAAT GCCGTTTTAA TTGAAACCTT AACCGCCATT GAAACCATTA AATCACTCGG TGTTGAAGCC CATTCGCAAT GGAAATGGGA ACAAGCGGTC GGAGAGATTG CCCGCGCCAG CTTAAAATCC AAAATGCTAC AAAGCTCGAT CGGTCGCGTG ACTGGGTTTA TGCAGCAAAT GAGTACGGTT ATTATTGTTC TGGTAGGCGT CTACCTGATT AAAGATGGGC TGTTAACGAT GGGGGGCTTA ATTGCCACCG TGATGTTAAG CCAAAGATCC ATTGGCCCGA TGGGACAATT TGCCAGCTTA ACCTCAACCT ATCAACAAAC GAAAACCGCT CTGGACTCGT TGAATGAGCT GATGAAGAAA GAAGTGGAAC GTCCGTCAGG TAAACGTTTT ATTCAACACC CTGTTTTTGA GGGCTCTATT GAATTTATCG ATGTCACCTT TACCTATCCG GGAGAAACCA AACCGGCTTT GAATAACGTT TCTTTTAAAG TTAATCCTGG CGAAAAACTA GGCATTATCG GACGAATCGG TTCCGGAAAA TCCACAATCG AAAAGCTCAT CCTTGGTTTT TATCATGTCG ATTCTGGGTC GATCTTAATC GATGGCATTG ACATCACACA GCTTGACCCG GCCGAATTAC GACGCAACAT TAACTATGTG CCGCAAGATG TGACCTTATT CAGTGGTGAT GTCCGTGAAA ATATCGCTTA TCGAGCCCCT TACGTTGAAG ACAGTGAAAT CCTGCGAGCA GCGAAATTGG CCGGCGTGGA CGACTTCATT AAAACCCACC CTTCCGGCTA CAGCTTAAAA GTTAATGAAG GCGGGGGGTC TTTATCAGGC GGTCAACGTC AAAGCATCGG CGTGGCACGT GCATTATTAC TTGATACACC GATTTATCTA TTTGATGAAC CAACAAATGC AATGGATGCC AACACGGAAC AAACCATGAT AGACCGCCTT AAAAAAGGCA CCTTGAAAAA TACCACAATT GTTGTAACCC ATAAAATGAG TTTGTTACAG CTTGTTGATC GTTTAATCGT CATGAGTAAT GGTAAAGTGA TTGCAGATGG TTCAAAGGCA ACGGTATTGG AAGCCTTAAA AACAGGACGG ATTAATAAAG CATAA
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Protein sequence | MENDQASAAR QNEETHTDTS AVDLGQPVID FKDPLLDCLV IYTKLNRHPF SKDALISGLP LANHDRLTPE LFIRAADRAN IVASFKKRAL KDIPNLVMPC ILTLKNNRAC LLEKIDLDAE KATVVLSDAP DGRLEVDLKQ LEEDYLGYAI YFTEKFQQAS KKEDLISTGQ GHWFWHTFWD NRGIYRDVLI ASVIINIFVL ANPLFVMNVY DRIVPNNAVE SLWVLAIGIS VVYMFDILLK FLRSYFLEMA GKKSDVIMSS KLFEQTLGLT MANRHGSIGA FANNLKEFDS IRNFFTSGTI ASLVDLPFVV IFLLVIFFIA GQIVLVPIAI IGLILMYSIL MKKPIQSSVE ATYEASSQKN AVLIETLTAI ETIKSLGVEA HSQWKWEQAV GEIARASLKS KMLQSSIGRV TGFMQQMSTV IIVLVGVYLI KDGLLTMGGL IATVMLSQRS IGPMGQFASL TSTYQQTKTA LDSLNELMKK EVERPSGKRF IQHPVFEGSI EFIDVTFTYP GETKPALNNV SFKVNPGEKL GIIGRIGSGK STIEKLILGF YHVDSGSILI DGIDITQLDP AELRRNINYV PQDVTLFSGD VRENIAYRAP YVEDSEILRA AKLAGVDDFI KTHPSGYSLK VNEGGGSLSG GQRQSIGVAR ALLLDTPIYL FDEPTNAMDA NTEQTMIDRL KKGTLKNTTI VVTHKMSLLQ LVDRLIVMSN GKVIADGSKA TVLEALKTGR INKA
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