| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0189 |
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| Symbol | |
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| ID | 3762245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 222204 |
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| End bp | 224381 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637784894 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_390459 |
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| Protein GI | 78484534 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTCAA GTCAACAATC ACGCTTCCTC AAACAATATG GCTGGCTCAT CGCGATTTCC
AGTATCTTGT TGATCTCCCT GATTGTTATG AGTCAAATTC TGCAAAACGC TTCGCAGTTT
GCACAAACCT ACTCCACCTT ATTGTTCATT TCACTTGGCG GCATGATTGT ATTGATCGTA
ATGCTTGTAC GCACCCTCCT CAAACTTCGA AAACAATACA AAGCCAATAT TCCGGGCCTC
AAACTCACCG TTCGATTAAC CACCATTATC GGCTTTATGT TGGGGGTCCC GCTCGCGATT
ATTTTTTATT TTTCAATGAG TTTTGTTCAT CAGGGAATCA ACCAATGGTT TGATGTTAAA
ACGGAAGAAG CACTGGAAAA TGCGGTCAAG CTCGTTCAAA TCACATTAGA CGATCAAACT
CGGCGCAATC TCAACAACAC CCAACAAGCT CTCAAGCTTT ATCGGGACGA ACTCTTTATC
ACCCCGGTGT TAACGCTGAA TAAATTAGGG GAGCAACTGA ATACGCGAGA AATCGCACTC
TACAAAAGCG ACGGTCAACT CATTGCTTAC AGCAGTCAGG ACAATGTCAA CATTTTGCCG
AAATCACCGG CTCCAAGACT GTTTCAACAA ATCCGTAAAA AATTAACCTA CGCCGCCATC
GAAACACAGT CTGGGTTAAA CACGTCTTAC CAAATCATTC GGATCATGTT GCCGATTACG
GATATACACA ACAATAAGCA CTATGCCTTG CAAGCCGTTT TTTCGATTCC TGAACAATTA
AGCCACTTAG CCGATACGGT TCGAATTTCG GCCAGCCAAT ATCAAGAATT GTCTTATCTG
AAAGGCCCGC TTAAAACCAG CTTTACCGTG ATTTTAAGCA TGGTGCTCTT ATTAACCATG
ATCAGCGCCC TATTGTTTAC CATCAAAACC ATTCAAAACA TTACCCGGCC CATTCGAACA
TTAGCGCGCG GGACAGAAGC GGTTGCAAAA GGAGATTACG CCATCTCCAT GCCCGTCGTT
CAAGAGGACG AAATGGGACA ACTCATTCAC TCTTTTAACG ACATGATTCA GCAGATAGCC
AAAGCACGAA ATGACATCAA ATTTGGGCAC CAACAAACTG AAATGCAGAA ACTTTATCTG
CAGGCGATTA TTAAAAACCT AAACAGCGGT GTCTTAACGT TAGACATGAA CTTACGCTTA
AAAACCATTA ATGATGCCAC CAATTCCATC CTCAACACCA ACCTGTTTAA ACAGCTTGGG
AAACCACTCA ATGAAATTCT AAAACAACCT GAAAGTCATC ATTTAAAACA GTTCTTTGAC
ACCATTTTTC CTTTATTTCG AAATGATGCT AAGCCCTGGA GTGAACAACT TACCTTTGAC
TGTAAAGAAG GCCAAAAAAT TCTACTTGTC CATGGATCAA CACTCCCCAG CCTTGACCAA
AAAGTAGGTG GGTTTGTTAT TGTTATTGAA GACATCACCC AACTGGTACA AGCACAGTTG
CACGCCGCTT GGAGCGACGT CGCCCAACGC TTGGCCCATG AAATTAAAAA TCCGTTAACC
CCCATCCAGC TTTCCGCTGA ACGGCTTAAT TATAAATTAG CCGACAAATT AATCTCATCC
GACCGACGTC TACTCAATAG AATGACGGAG ACCATCATTG AACAAGTTGC GGCCATGCAA
AACTTGGTTC AAGCGTTCAC CGAATATGCC GACACACCAG AGATTGAGCT CAGTCAACTC
AACTTGAACT CTCTCATCAA AGATGTTGTA AGCATGTATA AAGACCCAAA TGCAAACTGG
AAAGTTTCTT ACAAGACAGA TCCACAGTGC CCTAAAATCA CGGCGGATGC TTCAAAACTA
AGGCAACTGC TACACAACCT CATTAAGAAT GCCATTGAAG CCTGTGGAGA ACGACCAGAA
ACACACATTG ATGTCCGAAC CGATTGTTCG CAAGATGCGA TTAATTTTTC TATTTGTGAT
AATGGCCCGG GTATTCCCGA AAAAGCCAGA AACTGGATAT TTGAACCTTA CTCAACCGAC
AAACCCAAAG GAACGGGGTT GGGGCTGGCG ATAGTGAAAA AAATTGTCGA CGAACATCAA
GGACAAATTC ATGTAGAATC GGAACCCGAG CAAGGAACCT GTTTTATAAT AAACTTACCA
CAACACACTA AAGTATAG
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| Protein sequence | MPSSQQSRFL KQYGWLIAIS SILLISLIVM SQILQNASQF AQTYSTLLFI SLGGMIVLIV
MLVRTLLKLR KQYKANIPGL KLTVRLTTII GFMLGVPLAI IFYFSMSFVH QGINQWFDVK
TEEALENAVK LVQITLDDQT RRNLNNTQQA LKLYRDELFI TPVLTLNKLG EQLNTREIAL
YKSDGQLIAY SSQDNVNILP KSPAPRLFQQ IRKKLTYAAI ETQSGLNTSY QIIRIMLPIT
DIHNNKHYAL QAVFSIPEQL SHLADTVRIS ASQYQELSYL KGPLKTSFTV ILSMVLLLTM
ISALLFTIKT IQNITRPIRT LARGTEAVAK GDYAISMPVV QEDEMGQLIH SFNDMIQQIA
KARNDIKFGH QQTEMQKLYL QAIIKNLNSG VLTLDMNLRL KTINDATNSI LNTNLFKQLG
KPLNEILKQP ESHHLKQFFD TIFPLFRNDA KPWSEQLTFD CKEGQKILLV HGSTLPSLDQ
KVGGFVIVIE DITQLVQAQL HAAWSDVAQR LAHEIKNPLT PIQLSAERLN YKLADKLISS
DRRLLNRMTE TIIEQVAAMQ NLVQAFTEYA DTPEIELSQL NLNSLIKDVV SMYKDPNANW
KVSYKTDPQC PKITADASKL RQLLHNLIKN AIEACGERPE THIDVRTDCS QDAINFSICD
NGPGIPEKAR NWIFEPYSTD KPKGTGLGLA IVKKIVDEHQ GQIHVESEPE QGTCFIINLP
QHTKV
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