Gene Tcr_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0156 
Symbol 
ID3762448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp188049 
End bp189410 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content44% 
IMG OID637784861 
ProductMo-Co oxidoreductase dimerisation subunit 
Protein accessionYP_390426 
Protein GI78484501 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000433271 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATA AAATCGTTGA AAAGGTTGCA GTTCAGTCTG ATGAAAGTCG CAACCAAGGC 
CGTCGTGCTT TCCTAAAAGG AAGCGCGGCT GTTGCCGGTG GGGTTCTTTT TACAAAGGCC
GCATCAGCAG CAGAAGGCGC TAAATATGAT CCTGCTAAAG CGGTTGCGCC TTACGCTGGA
AAAGAAGAAA TGACAGACGT TCTAGATGTG CAAGCAGCAC GTAAATCTCT AGGATTTGGT
GTTCGTAAAT ACCCTTATGG GATGCCTTCA CCTTATGAAA AAGAAGTGCA GCGTCGTACA
CTAGAGTGGT TAACACCTGA CTCTATGGCT TCTATTACTA TGACGCCATT ACAAAGCCTA
CACGGAATCA TTACCCCTAA TGGTCTTCAC TTTGAACGTT TCCACGGTGG TGTGCCAACT
ATCGATCCTG ATAAGCATCG TTTAGTTATC CACGGTTTAG TTGAACGTCC TCTTATTTTT
ACAATGGACG ATCTAAAGCG TTTCCCTTCA ATTTCTCGAA TTCACTTTGT TGAGTGTCCT
GCGAATGGTG CGATGGAGTG GAAAGGGGTT CAGTTGAACT CTGTTCAGTG GACACACGGT
ATGATGTCTT GTGTGGAATA CACTGGTGTT CGTTTATCTG ACCTTCTAAA AGAAGCAGGT
ATCAAGCCTG AAGGTAAGTG GATTCTTCCA GAAGGTGCGG ATGCATCTGG TATGTCACGT
TCAATTCCAG TTGATCTAGC AATGGATGAT TGTTTTGTTG CTTACGCGCA AAATGGTGAA
GCGCTTCGTC GTGAGCAAGG TTATCCGATT CGTTTAGTTG TTCCTGGTTG TGAAGCAAAC
ATGTGGGTTA AATACCTACG TCGTATCTAT GTACACGATG TGCCTATGCA GCACCGTGAA
GAAACATCTA AGTACACTGA ATTGATGCCT GATGGAACAG CACAGCGTTT CTCATGGTAT
ATGGAAGCTA ACTCTGTTAT CACTTATCCA TCTCCAGACT TCAAAATGCA AGGTCCTGGT
AAGTACTTTG TACGTGGTTT GGCATGGTCA GGCCGCGGTA AAGTGGCTCA TGTTGATGTG
TCTTTTGATG GTGGTAAAAA CTGGAAAGAA GCACACTTTA CTTCACCTGT ACTAGATAAA
GCTTGGACTC GCTTTGAAAT AGAGTGGGAT TGGGATGGTT CAGAAGCCTT TATGATGAGC
CGTGTAACTG ATGAAACCGG TTACGTTCAG CCACCTATGC CTCAAATGCG TAAATTAGAA
GGTACGAACA ACGTTTACCA CCGTACTGCG ATGGTTACTT GGCGTATCCA TGCTTGGGAT
GGCGGCAAAA ACGGAGGTAT GATTGAAAAT GTTCAGTACT AA
 
Protein sequence
MTDKIVEKVA VQSDESRNQG RRAFLKGSAA VAGGVLFTKA ASAAEGAKYD PAKAVAPYAG 
KEEMTDVLDV QAARKSLGFG VRKYPYGMPS PYEKEVQRRT LEWLTPDSMA SITMTPLQSL
HGIITPNGLH FERFHGGVPT IDPDKHRLVI HGLVERPLIF TMDDLKRFPS ISRIHFVECP
ANGAMEWKGV QLNSVQWTHG MMSCVEYTGV RLSDLLKEAG IKPEGKWILP EGADASGMSR
SIPVDLAMDD CFVAYAQNGE ALRREQGYPI RLVVPGCEAN MWVKYLRRIY VHDVPMQHRE
ETSKYTELMP DGTAQRFSWY MEANSVITYP SPDFKMQGPG KYFVRGLAWS GRGKVAHVDV
SFDGGKNWKE AHFTSPVLDK AWTRFEIEWD WDGSEAFMMS RVTDETGYVQ PPMPQMRKLE
GTNNVYHRTA MVTWRIHAWD GGKNGGMIEN VQY