Gene Tcr_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0100 
Symbol 
ID3762234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp127779 
End bp129284 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content44% 
IMG OID637784805 
Producthypothetical protein 
Protein accessionYP_390370 
Protein GI78484445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAGA TGAAACACGC TTCGTTATGG GTGGCGCTAT TAGCCAGCCT ACTGTTTGTC 
CATGCCGTAC AAGCGGAAAG TAAAATTTAT CCGAAAGAAG TGGTGTTAGG AAATCCGGTA
ACATGGATTT TATCTGGCTA TGAAATCGAA TCGGATTATG AAAAGCTCGA TCTAACCGAG
TTGCAAAAGC AGTTTGTGAT TTACGACATT GATGGTCATT CCGATCGTTT ACGAATTAGA
TTGTATCCGG TTAAGACAGG CAATTTAATT ATTCCTGAAC TCAAATCCGG AAGGCTTCAC
GTGAAACCTA CCACAATTAA GGTTCTTAAA AATCCAGAAG TGAGCGTGTC TTGGCAAGCA
CCGAAAAAGA CGGTTTATCA AAATGAAGTG GTGTTGTGGT CGGCCAATGT GAACGCCGAT
AGTGCTTCTA TTTTGATTGA AAATGTCTTG CCTGAAAACA CGGATGACTT GCCATATGAA
TGGATTGGTC AAGCAAGTCC TGAGACACAA GAGGGTGCTT TTTTTGGTAA AAAAACCGCT
TTAACATCCG CTGTGGCAAT GAATCAAACC GGTCTTATTA CGTTAAAGCC ACCCATCATT
CGAGTGCAGA ATGAATCCAA TAAACGCTGG GTTTTTGGTG CACCACCTGT CTCCATTCAG
GTACGCTCGC TGCCGAGCTA TTTACCCGCG GTGATCCCCT TAGGCAAGGT CTCCTTGCAA
AACGCTTTTT CGTCCCATTT AATCGTCAAG GGTCGTTTAT ACAATTGGTA TTTACATTTA
AACGGCGAGA ACGTCGCTGT TTCAGACTTA CCGAATATCA CCAATCAATT AGGTCATGAT
GCTTCTATCG AATGGTTAAC GCCGAATCTT GAGAAACAAA CCACAATGAC CTCTGCGGGG
ATGTCGAGCC AGGTCAAGAT TGACCAACCT TTCCGTGTGA ATCATTTTGG GTTGACACAT
CTTCCTGCAT TGCGATTAAC CTATTTTGAT GTCAACTCAG GCAAGTTAGA AGATCAGTTT
GCTCCCGCAC AAACTCTTGT TGTCCTTCCT CTGTGGCTAA TGATTGTTTT TCAAGGGGTG
GTTGCGATCA TTGGTGTATT GATTGTCTTG GCACTAGGTG CATTATTGAA AGCGAGTTGG
ACAAAATATC GGTTGGTGAC AACGCTGAAA AAAGCCGATT CTGCAACAGC TGTTTGGCGT
GCCGTTATGC GTTGGTCTCA AAAACAGTTA AAGCCAATTA AGAAAGGCCA GGCCTGGGTG
TTTTTTCAAC CAGAGAGTTT GGCCGAAAGT GAGCTCTCAA CACAAAGTTT GGGGCAATGG
CTGGAGCGGT TTGAATCTCA ATATGGGCAC AGTGATGACG CCAGAGCCAT GGTTCGGCTT
TTAAACGAGC AGTTTTACAG CCCTAAGCAT GAACCGATGC GACAACAAGC TCTGATATGG
GCTCAGTCAC TGCCAAAATT TGACTGGACT CGTTTTAAAC CTGATAAAAC GTCACGAATC
CAGTGA
 
Protein sequence
MVKMKHASLW VALLASLLFV HAVQAESKIY PKEVVLGNPV TWILSGYEIE SDYEKLDLTE 
LQKQFVIYDI DGHSDRLRIR LYPVKTGNLI IPELKSGRLH VKPTTIKVLK NPEVSVSWQA
PKKTVYQNEV VLWSANVNAD SASILIENVL PENTDDLPYE WIGQASPETQ EGAFFGKKTA
LTSAVAMNQT GLITLKPPII RVQNESNKRW VFGAPPVSIQ VRSLPSYLPA VIPLGKVSLQ
NAFSSHLIVK GRLYNWYLHL NGENVAVSDL PNITNQLGHD ASIEWLTPNL EKQTTMTSAG
MSSQVKIDQP FRVNHFGLTH LPALRLTYFD VNSGKLEDQF APAQTLVVLP LWLMIVFQGV
VAIIGVLIVL ALGALLKASW TKYRLVTTLK KADSATAVWR AVMRWSQKQL KPIKKGQAWV
FFQPESLAES ELSTQSLGQW LERFESQYGH SDDARAMVRL LNEQFYSPKH EPMRQQALIW
AQSLPKFDWT RFKPDKTSRI Q