Gene Tcr_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0098 
Symbol 
ID3762232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp124742 
End bp125833 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID637784803 
Productvon Willebrand factor, type A 
Protein accessionYP_390368 
Protein GI78484443 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTC AAGAATTGAT TCAGGTTTTT CAAAACTGGC ACCAGGTTCA GTTTGTTCAT 
CCGGAATGGT TTTATTTACT CGGATTGGTT CCGTTCTTAG GGCTGTTGCA TTGGGTACGA
GCCAGCTCAT CGGATTGGGA GCAGACGGCG AATGCAAAAT CACTCTTATT CCGTCATCCT
TTGATTGATC AGTTAGACTT TAATGCCAGT GCTCCAAGTT CTTCCAAAGG GCTTAGATGG
TTCTTGAATT TGTTACGTTT AATGCTCCTG GTAGGGATTG TGACGGCATT GGCAACGCCT
GTTAAAAAAG TCCCTTTGCC GCCGGAACCG CAAACTAAAA CCGTAAGAGA TATCGTGTTT
GTGGTCGAAA CGTCAGTGAG TATGGTGTTA GAAGATTATC AAATTGATGG TGAACCACAA
AGCCGGATAA AAGTCATTCA AACGGTGCTG GATCAATTTA TTTCAGGGCT GGCAGGCAAT
CGCTTCGGGT TTATTCTGTA CGCAGATGAT GCGTATACTT TAATGCCGTT GACGTCAGAT
GCCACTACGG CGCGGTTGAT GTTAAAACGC TTAAAACCTT ACTTGGCTGG GCGCACCGAT
GAAGCGACCG GAGAAGCGTT GGGATTAGCC TTGCAACAGG CTGAAAAAAG CACGGATTCA
ACAGAAAATA GAATCGTGGT GTTGATTTCT GACGGTTCCA CCCGAGACAG CCGATTGCCG
ATTGCCGAAG CCATTAACTA TGCACAAGGA TTAAACATTC CAATCTACAC CATTGGTGTT
GGAGCAAACT CTAAAGATGC GGATAAAAGA GAGTTCCGTG GACTTTTGTA TGAAGCGCTG
GAATCAAGTT CATTGAAACA AATCGCAGAC CAGACTCAGG GCCGTTATTA TCAGATCGGC
AGTGGGCAAG ATTTGCAAAA AGTATTGCAG GCGATTGATC AAACTGAAGG CGTGGCTATG
GACGTGCCTA GAAAGAAATT TCAGCAAGTC GCGCTCTACC CATATGTTAT CGCTTTGAGT
GTGATGCTGT TTGTACTGTA TTTTGCCCTT GTGCAATTAC TGAGTAGTCG ATTGCAACAG
GAGGCCGCAT GA
 
Protein sequence
MAFQELIQVF QNWHQVQFVH PEWFYLLGLV PFLGLLHWVR ASSSDWEQTA NAKSLLFRHP 
LIDQLDFNAS APSSSKGLRW FLNLLRLMLL VGIVTALATP VKKVPLPPEP QTKTVRDIVF
VVETSVSMVL EDYQIDGEPQ SRIKVIQTVL DQFISGLAGN RFGFILYADD AYTLMPLTSD
ATTARLMLKR LKPYLAGRTD EATGEALGLA LQQAEKSTDS TENRIVVLIS DGSTRDSRLP
IAEAINYAQG LNIPIYTIGV GANSKDADKR EFRGLLYEAL ESSSLKQIAD QTQGRYYQIG
SGQDLQKVLQ AIDQTEGVAM DVPRKKFQQV ALYPYVIALS VMLFVLYFAL VQLLSSRLQQ
EAA