Gene Tcr_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0089 
Symbol 
ID3762223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp116229 
End bp116828 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content46% 
IMG OID637784794 
ProductSmtA protein 
Protein accessionYP_390359 
Protein GI78484434 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAG CTGCCCATAA AACGGATCGC AACTTCGATA CTTTAATCGA TCAATTTGAA 
AAACGTGTTT ATGATACCGT CAAAGGGGAA TGGCGACTCA AATTGCTTAA AGAAGACTTG 
CACACTCTTA GAAACCCGAC GCCAAATCTC CCAGGCCTGA CCAAAACAGC CACAGCTCAG 
CCTGCCAACA CACTTTCCGT TTGGGACGCC GGTTGTGGGT TTGCCCAAAT CAGTCAATGG 
TTTGCCGAAG CAGGACACTC TATTACCGCC TGTGATTTAT CCCAGAAAAT GTTACAAAAA 
GCACAACAAA ACTTTGATGA GAATCAGCTG GAAGCCACCT TTTTTCACGG CTCAGCACAG 
TCACTGGCGT CCACCTTGCC ACAGTTTGAT CTGGTGTTGT TCCATGCGGT GATCGAATGG 
CTGGCCGAAC CAGAAGCCGG TCTGACGGCC ATAGCTGAAA AAGTAAAACC CGGTGGTCAT 
TTGTCTTTAT TGTTTTACAA CCGTAATGCG TTCGTTTACA CCAATGTCTT AAAAGGTCGC 
TGGCGCTGGC AACATATTTT GTCGAATGCT TTTATCGGGA AAGGGAAATT ATATCTATAA
 
Protein sequence
MSKAAHKTDR NFDTLIDQFE KRVYDTVKGE WRLKLLKEDL HTLRNPTPNL PGLTKTATAQ 
PANTLSVWDA GCGFAQISQW FAEAGHSITA CDLSQKMLQK AQQNFDENQL EATFFHGSAQ 
SLASTLPQFD LVLFHAVIEW LAEPEAGLTA IAEKVKPGGH LSLLFYNRNA FVYTNVLKGR 
WRWQHILSNA FIGKGKLYL