Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0081 |
Symbol | |
ID | 3761466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 102827 |
End bp | 103723 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637784787 |
Product | DNA/RNA non-specific endonuclease |
Protein accession | YP_390352 |
Protein GI | 78484427 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA ACACCTCTCA CCTGACCCAA CTGTTATTCA AAGAACTGGC TAAACAACCC AAATTGCTGC AAATCAGCTT TTTCTGGCTT CCGGTAATAT TTGGTTTTGT CCTGCTGGCC GGCGGCTTAA AGTATGTTTA TGAAACCGAA GTCGCGCGCC CTGCGATGGC GTATATGGGC GTTCCTAAAA GTAATCATGA TTGGTCAAAC TTAACCCATA CCTTGCGTAA TAAAGGGTTT ATGTTGGCCT ACTCCGAAAG ACTCGCCAAC CCGATCTGGG TAACCTACAA AGTAACACCG ACCAAAGTTA AGTATGGCAA GCGCCCTCAC TTTCAGGCCG ACTGGCGCTC ACTGGCGCAT ATTCGCCATG AAGACTATAC CAGCAGTGGT TATGATCGCG GGCATATGGC GCCTAACTAT GTCATCGCCA GCCGTTATGG CTATGAAGCT CAAAAAGAAA CGTTTCTGAT GACGAATATC ACCCCACAAA AACCCAGTTT TAATCAGAAA ATCTGGCAAC GACTGGAAGA GGTCAGTGCC GATGTTTTTT CAAAACAAGT CGGCACTTTT TGGGTCGTCA CCGGTCCCAT TTTTGACGCG AAGCCTAACA CCCTGAAAAA AGCACCGGTG GCTATTCCAA AAGCCTTTTA TAAAATCTTT ATTCGCCCAG AAATAGACGG CAAGCCCACC ATTGCGTTGG CGTTTATTCT GCCGCAGACT GCCAAACCAA AAGACAGTTT GCTAAACTAC GTCACAACCA TTGATCAGAT TGAGCAACAA ACGGGAATCG ATTTTTTCTG GCAGTTAGAA GACACCCTAG AAACGGCCCT TGAAGCAAGC AAAAACCCCC AGGCCTGGTC TTTAGAAAAA GTGGCTAATT TACCCAGCCG CTATTAA
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Protein sequence | MSKNTSHLTQ LLFKELAKQP KLLQISFFWL PVIFGFVLLA GGLKYVYETE VARPAMAYMG VPKSNHDWSN LTHTLRNKGF MLAYSERLAN PIWVTYKVTP TKVKYGKRPH FQADWRSLAH IRHEDYTSSG YDRGHMAPNY VIASRYGYEA QKETFLMTNI TPQKPSFNQK IWQRLEEVSA DVFSKQVGTF WVVTGPIFDA KPNTLKKAPV AIPKAFYKIF IRPEIDGKPT IALAFILPQT AKPKDSLLNY VTTIDQIEQQ TGIDFFWQLE DTLETALEAS KNPQAWSLEK VANLPSRY
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