| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0071 |
|---|
| Symbol | |
|---|
| ID | 3761456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 89481 |
|---|
| End bp | 91181 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637784777 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390342 |
|---|
| Protein GI | 78484417 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGTC AGACTATGGA TCGAAACACT AAACAGCAAC ACTGGCTAAC CAAACTTATT
TTGATTACCC TCGCCCTTAT TTTAATTTTG TTATTGAGCA CACAAGTGTT TGCAAAAAGT
GTCACGGTGA AGATTGATCA TCAAAGCGTT GAAATGGGCG ACATTATTTC AGTGGTCATA
AAGACGGACT TTCAAACCTT CGAAACCCCT GATTTTTCCG GGTTAAAAGA TCAATTTGAT
ATTCTGGGCA CGCAACGAAG TAGCCAGATT GAAATCATCA ATGGTAACTA CCAGTCCTAC
TCACGATGGG ATTTACGGCT CACCCCAAAA CAGATAGGTG ACCTAGTGAT TCCGCCGCTT
ACAATCGGCG GGGTGATGAG TGAACCCCAT ATTATCAAAG TAACCGAAAA TAAAATGGTG
CCGGGTGTCG AGAAAGGAAG CAGCTTTTTG GAATCAAGCA TCAATCTGAC CAGCCCTTAT
GTGCAACAGG AAGTGCTTTT CACTTTACGG TTTTATCATT TAGGACAGTT CATTAATGGC
AACATTCGTC CACCGACCTT TCATCAAGCC ATCACCGAAA ATATTCGGAA CCAATTCCAC
TACCAAAAAA ACGTTAACGG GCGACTCTAT GATGTTTACG AATGGACTTG GGCTTTTTAT
CCTCAAAAAA GCGGCCCGAT GGTCATTCCG CCGCAAAGTT TCAACGGTAG AATTCAATAC
CGAGGACAGC TGAAAGCCGT TAAAGATCAA ACGCAATCCA TTGAGTTGAA GGTTCTGCCA
AAACCCAAAA GTTACCCGAC CAATTCGGCT TGGTTGCCCG CCAAAGAAGT GACTTTGAAG
GACGATTTAC AAACGTCGAC GCCAGTCAGA GTGGGGGATT CGATTACAAG AACGCTCTCA
TTAAAAGCGG AAGGATTACT CGCCTCGCAA CTTCCAGAGT TTCAATTTAA AGACCAAGCG
GGATTCCACG TTTACCCAGA CAAGGCAACC AATAATAACC AGAAAACCGA ACAAGGAATG
CTGAGCCAAA AACTTCAGAA AATCGCCATT GTTCCAACGC GAGCCGGCCA TGTGACCTTG
CCGGCTATCA CGGTCAGCTG GTGGAATACA CAAACCAATC AATTGGAAAC GCAGACGTTA
GCCGAAAAAA CCATCCGTGT CTTGCCGGCC GTAAACAAAC AACAAAATCC TTTTGACACC
ATGACCCCCG AACCGGTTAC TGAACCTAAA CCGATGATGA GCTCATCAGA TAATACAGGC
GTTTGGCAGA GCGCTGCCGG GCTGTTTGCT GTGCTATGGA TCCTCAGCAG TGGCCTGGCA
ATTCACTTTT ATCGAAAAAG AAAAATTACA GCCATTGCGA CTGTTGACTC AGAATCGGAC
AAAAACAGCC AGGCCTGGCC AGATAATCAT CCTGCACTGG AAAAGCTATG CCAAGGAAAT
AAAAACGGTG TGAAGGATGC TAGAATGCTT TATCCTGCCA TTTTAGCCTG GCAACAACGC
TATCCAGAAA AAGAAAATGA GACGTTTAAA ACACATTTGC AGGCCTTAAA AGCGCATTTG
TATCACCAAG CAGACTTGCC GCCAGACACA CTGAGCGCTC TGTGCGATGA CATCGCCCGT
TTGAGTGCAC AACAACCCAA GTCTTCAAAG AAGACTGGAA AGCACCTTGA TCCTCTGTAC
CCAAATGAAG TTGATGCTTA G
|
|---|
| Protein sequence | MLSQTMDRNT KQQHWLTKLI LITLALILIL LLSTQVFAKS VTVKIDHQSV EMGDIISVVI
KTDFQTFETP DFSGLKDQFD ILGTQRSSQI EIINGNYQSY SRWDLRLTPK QIGDLVIPPL
TIGGVMSEPH IIKVTENKMV PGVEKGSSFL ESSINLTSPY VQQEVLFTLR FYHLGQFING
NIRPPTFHQA ITENIRNQFH YQKNVNGRLY DVYEWTWAFY PQKSGPMVIP PQSFNGRIQY
RGQLKAVKDQ TQSIELKVLP KPKSYPTNSA WLPAKEVTLK DDLQTSTPVR VGDSITRTLS
LKAEGLLASQ LPEFQFKDQA GFHVYPDKAT NNNQKTEQGM LSQKLQKIAI VPTRAGHVTL
PAITVSWWNT QTNQLETQTL AEKTIRVLPA VNKQQNPFDT MTPEPVTEPK PMMSSSDNTG
VWQSAAGLFA VLWILSSGLA IHFYRKRKIT AIATVDSESD KNSQAWPDNH PALEKLCQGN
KNGVKDARML YPAILAWQQR YPEKENETFK THLQALKAHL YHQADLPPDT LSALCDDIAR
LSAQQPKSSK KTGKHLDPLY PNEVDA
|
|---|
| |