Gene Tcr_0067 details

Gene Information

• Locus tag: Tcr_0067
• ID: 3761452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 82491
• End bp: 84542
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637784773
• Product: oligopeptidase A
• Protein accession: YP_390338
• Protein GI: 78484413
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0339] Zn-dependent oligopeptidases

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCCAT TATTACAAAC AGATCAATTG CCAAATTTTG AAGCGTTTCA CGTGGAACAC 
ATTGTTCCGG CAGTGGAGAC GTTATTATCA GAAAATCTGG CGGAGATTGA AACCTTAGTC 
GATCTCAGCG AGGCACCGAC CTGGGAAAAT TTTGTTGAAC CTTTAGAGGT GCTGAGCAAC 
AGATTAGAGC GTGTCTGGGG CCCAGTAGGG CATCTGGATG CGGTGAAAAA CTCTGATGAA 
TGGCATCAGG CGTATAGCGA TTGTTTAGAA AAGATCACAG ATTTTTATAC GCAAATGGGG 
CAGCATCAAG GTCTGTTTAA AAAGTTTCAA CAGATTGCGC AATCGGCCGA GTTTGAACAG 
TATTCTCTGG CGCAGAAAAA AGTGGTTGAA AATGCACTGC GTGATTTCCG TTTATCGGGA 
ATTGATTTGC CGAAAGATAA ACAAGCCGAG TATAAGGCGT TGTCACAACA GCTATCACAA 
CTAGGCAGTC AGTTTGGTAA TAACGTGTTG AAAAGTACCC AGGCCTGGTC AAAATTCATT 
GAAGATAAAC AAACCTTGGC CGGCTTACCT GAAAATGCCA TGGGGTTGTT GGCGCAGTTA 
GCCGCGCAAA AAGAAGCTTA TCAAGACAAA AAAGGATGGT TGGTAACATT GGACTTTCCA 
TCCTATCTGG CTGTAATGAC ACATGCCGAT AATCGTGAGT TGCGTGAAGA AGTGTATCAA 
GCGTTTGCGA CACGTGCGTC TGAAATGGCG CAAGATCCGC AATACGACAA CTCGGATAAC 
ATTGAAAAGA TTTTAAAACT TCGCCATGAA AAAGCCCAAT TGCTTGGCTT TGAACACTAT 
GCTGAATTGT CGCTGGCCAC CAAAATGGCG GATACGCCCG AACAGGTTAT TGGATTTTTA 
AGGGATCTGG CAAAAAAATC TAAGCCGCAA GCGGAAAAAG AGTTGGCCAC CCTAACGGTG 
TTTGCTCAAA AAGAACTGGG AATCGACACC CTGCAACCTT GGGATGTCAC CTATGCCTCT 
GAAAAATTTA AAAATGCCAC CTTGTCTTTA TCACAAGAGA AATTACGCCC TTATTTCCCG 
GTAACCAAAG TGTTGGAAGG CTTGTTTAAT ATTACCGAAA CGTTGTTTGA AGTGTCGGTT 
AAAGAAAAAC AAGGGGTGTC GGTTTGGCAT GATGACGTGC GTTATTTTGA AATAATGGAT 
GCGGCGGGTC AAAAGGTGGC AGCCTTCTAC TTAGATTTGT ATGCACGGGA AAATAAGCGC 
GGTGGAGCCT GGATGGATTC CGCCATCAGC CGTTGGCGTC ATCCGGAGGG TGTTTTGCAA 
TCTCCGGTGG CTTATCTTGT GTGTAATTTT ACGCCACCAA TTGGCGACCA ACCGGCTTGC 
TTAACGCATG ATGAAGTCAC TACTTTGTTC CATGAATTCG GCCATGGATT GCATCACATG 
TTAACCGAAA TGGAAAATTT TGATGTGTCT GGCATCAATG GCGTGCCATG GGATGCGGTG 
GAATTACCGT CTCAATTTAT GGAAAACTTC TGCTGGGAAA GAGAAGGTAT TGACCAAATG 
ACGGCGCATA TTGAAACAGG GGATGTCTTG CCCGACGATT TATTTGAAGC GTTGCAACAA 
AGTCGAGGGT TTCAGTCGGC GATGATGATG GTGCGTCAGT TAGAATTTGG GTTATTTGAT 
TTTCTAGCGC ACGCAACCTA TAACCCTTCG GCACCGCAAC CGGTGTTAGG GTTAGTCAAC 
CAAGTTCGTC AAGAAGTCGC TGTGATCATG CCGCCGGACT ATAATCGCTT TGCACAAAGT 
TTCAGCCATA TCTTTGCAGG CGGTTATGCG GCGGGTTATT TCAGTTATAA ATGGGCGGAA 
GTATTGTCTG CAGATGCCTT CAGTTTGTTT GAAGAAGAAG GCATTTTAAA CCCAGAAATT 
GGAGTGAAAT TTAAAAATAC CATTTTAGCT GCAGGTGGTT CCATTCATCC TATGACGTTG 
TTTAAAGCGT TTCGAGGACG TGAACCTGAA ATTGATGCGT TATTACGCCA TTCAGGCATT 
AAAGCTGCCT GA 

 

Protein sequence

MNPLLQTDQL PNFEAFHVEH IVPAVETLLS ENLAEIETLV DLSEAPTWEN FVEPLEVLSN 
RLERVWGPVG HLDAVKNSDE WHQAYSDCLE KITDFYTQMG QHQGLFKKFQ QIAQSAEFEQ 
YSLAQKKVVE NALRDFRLSG IDLPKDKQAE YKALSQQLSQ LGSQFGNNVL KSTQAWSKFI 
EDKQTLAGLP ENAMGLLAQL AAQKEAYQDK KGWLVTLDFP SYLAVMTHAD NRELREEVYQ 
AFATRASEMA QDPQYDNSDN IEKILKLRHE KAQLLGFEHY AELSLATKMA DTPEQVIGFL 
RDLAKKSKPQ AEKELATLTV FAQKELGIDT LQPWDVTYAS EKFKNATLSL SQEKLRPYFP 
VTKVLEGLFN ITETLFEVSV KEKQGVSVWH DDVRYFEIMD AAGQKVAAFY LDLYARENKR 
GGAWMDSAIS RWRHPEGVLQ SPVAYLVCNF TPPIGDQPAC LTHDEVTTLF HEFGHGLHHM 
LTEMENFDVS GINGVPWDAV ELPSQFMENF CWEREGIDQM TAHIETGDVL PDDLFEALQQ 
SRGFQSAMMM VRQLEFGLFD FLAHATYNPS APQPVLGLVN QVRQEVAVIM PPDYNRFAQS 
FSHIFAGGYA AGYFSYKWAE VLSADAFSLF EEEGILNPEI GVKFKNTILA AGGSIHPMTL 
FKAFRGREPE IDALLRHSGI KAA