Gene Tcr_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0065 
Symbol 
ID3761450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp79637 
End bp80056 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content42% 
IMG OID637784771 
Producthypothetical protein 
Protein accessionYP_390336 
Protein GI78484411 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCT ACCAGACGAC CTTAGCGTTT CACACTTCAA ACCGCGGTAC ATTTAATATT 
ACAGATGATA TTGATGACGT TATAGCGGAA TCGGATATCA GTATCGGTCT TTGCCATGTC
TTTTGCCAAC ATACCTCGGC CTCTTTAATT GTGACAGAGA ACGCCGATCC GACCGTTCGC
CAGGATATTG AATATTGGAT GAAAAAGAAT GTCATCGATG GCGACCGGAA CTTTCATCAT
AATTATGAAG GCGATGATGA TATGTCTGGC CATATTCGGA CAATTTTGAC AGAAACCAGT
CACACCCTTC CCATTTCAAA CGGCGAACTG AATTTGGGAA CATGGCAAGG TCTCTTTTTA
TATGAACATC GTATTGGACG CTTTAATCGA CAGGTTATCG TGACCATTCA AGGAGAATAA
 
Protein sequence
MKIYQTTLAF HTSNRGTFNI TDDIDDVIAE SDISIGLCHV FCQHTSASLI VTENADPTVR 
QDIEYWMKKN VIDGDRNFHH NYEGDDDMSG HIRTILTETS HTLPISNGEL NLGTWQGLFL
YEHRIGRFNR QVIVTIQGE