| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0056 |
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| Symbol | |
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| ID | 3762210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 67064 |
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| End bp | 68128 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637784762 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_390327 |
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| Protein GI | 78484402 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTT TATGGGTGAT ATGTTTATTG TCAGGCCTGG CTATTTTAAG TGGATGTCAA
AAAGCTGAAC CCGAAACGGA AGACATCATC CGACCCGTTA AATATATTAC TGTTTCGGAA
GCAAATAACC TGGCAAAACG CGAATTTCCT GGGATACTTC AGGCAAAAGA TCGTGTCGAT
TTAGCTTTTC AAGTTTCTGG TAAACTCAAA AAATTGCCTA TCAAAGAAGG TCAAAAAATT
GAGAAGGGTG CGTTAATTGG CCAATTAGAT CAAAGAGATT ATCAAGCCAA GTATGATTCC
GCCGTAGCTG AGTTTAAAAC TGCATCAGCT GATTTCAAAC GTGCTAAACA ATTAATTAAA
AAAGAATTTA TTTCCCAATC CGATTTTGAC AAGATTAGAG CCAAAAAAGA CATGGCAGAT
GCCAATGTCC GTCTCGCAAA AAAAGCACTT GAAGATACCC TTTTAAAATC GCCTTTTACA
GGTACCGTTG CCAAGCAATA TGTTCGAAAT TTCACAGATA TTCAGGCAAA GGAACCGATT
GTCAGTCTGC AGAATAATAA TGCCTTGGAA ATCGTGGTCT CCATTCCAGA ATATTTGATG
ATTCGAAATT CCAATGAGCA ACGGCAGCAT CTAAATCTTG TCGCTACTTT TTCCAATATC
CCAAATGAAA GTTTTGAATT GAAAGTTAAC GAATTCGCTA CTGAAGCAGA TGCCACAACA
CGGACTTATA AAGTGACATT GGGTATTTTG GATAAAAAAG GGTTTAGCCT TTATCCAGGT
ATGACGGCAA ATGTTTATGT CAGTGGAGAA ACATTGGAAT TTGTGAATCT GATTCCAGTA
AATGCGGTTT TTTCCGATCC TAAAGGTAGT GATAAGAAGT TGGTTTGGAA AATTGACTCT
CATAACCAAG TCCATCAACA AGTAGTTGAA GTCGGAGAAT TGAAAAAAGA TCAGATTGAA
ATTATTAATG GGGTTGAAAT CAACGATAAG ATTGTCACAG CTGGAGTGCA TCATCTTGTC
GAGAATCAGC AAGTGAAATT GTCTGTATCT TCTCAAATGC CTTGA
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| Protein sequence | MKRLWVICLL SGLAILSGCQ KAEPETEDII RPVKYITVSE ANNLAKREFP GILQAKDRVD
LAFQVSGKLK KLPIKEGQKI EKGALIGQLD QRDYQAKYDS AVAEFKTASA DFKRAKQLIK
KEFISQSDFD KIRAKKDMAD ANVRLAKKAL EDTLLKSPFT GTVAKQYVRN FTDIQAKEPI
VSLQNNNALE IVVSIPEYLM IRNSNEQRQH LNLVATFSNI PNESFELKVN EFATEADATT
RTYKVTLGIL DKKGFSLYPG MTANVYVSGE TLEFVNLIPV NAVFSDPKGS DKKLVWKIDS
HNQVHQQVVE VGELKKDQIE IINGVEINDK IVTAGVHHLV ENQQVKLSVS SQMP
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