Gene Tcr_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0051 
Symbol 
ID3762205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp62478 
End bp64121 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content43% 
IMG OID637784757 
Productacetolactate synthase 
Protein accessionYP_390322 
Protein GI78484397 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR02418] acetolactate synthase, catabolic 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAT CTAATCTCTT CGTACAATGT TTGGAAAACG AACAAGTCGA ATACGTCTTT 
GGCATTCCTG GCGAAGAAAA TATGGATATG ATGGATGCGT TATTAGATTC CGATATTGAA
TTCATTACCT GTCGCCATGA ACAGGGAGCG GCATTCATGG CCGATGTTTA CGGTCGTTTA
ACGGGTAAAG CCGGTGTTTG CTTATCCACC TTAGGGCCTG GTGCCACTAA CTTAGTGACC
GGCGTTGCAG ACGCTAACAT GGATAATTCC CCTGTTGTCG CAATTGCCGG GCAAGCCGCC
ACCACCCGTT TGCATAAAGA ATCGCATCAG GTCGTCGATT TGGTGAATTT ATTCAAACCA
ATTTCTAAAT ACGCCACCCA AATATTAGAA CCTGAAACCA TTCCAGAAGT GATTCGAAAG
GCGTTTAAAT TAGCTCAAGC AGAAAAGCCT GGCGCGGCAT TTATTGATTT TCCGGAAAAT
GTCAGTGAAA TGCTGACGCC TGAAAAACCC TTACCGGTTA TTCAATCTCG TTTGTCATTA
GCCGATCATA AATTAATTGA AAAAGCCGCC TCCATTATCC AGCAAGCTAA AAAACCGCTT
ATCTTGGTTG GAAACGGCGC GGTTAGAGCG AATGCCAGCC GTCAATTGGA AGCCTTTTCA
AAACATTATC AAATTCCCCT CGTGAATACC TTTATGGCAA AAGGCGCGGT TCCCCATTAT
AAAAACCCTT TGTCAGTGGG CACCACAGGA TTACAAAAAG GCGACTATGA AAACGGTGGT
TTTGCCGAAT CGGATTTGGT GATTTGTATT GGCTTCGACA TGGTGGAATA CCATCCTCAT
TTATGGAACC CAAACCGGGA ACATACCATC ATTCACATTG ATACTTGCCC GGCCGAAGTC
GATTACAGTT ATATTCCGGA TGTGGAACTC ATTGGAAATA TTGGTCGTAA TCTAAGTGCT
TTAATGGAAA AGTTACCTCA TAAAGAATAT GAACCCATAC CGTTTCCATT AAGAGAAGCC
ATGATTCAAG AAATGGAACG CTGTTCTGAC AGTGACGCCT GGCCAATGAA ACCACAAAAA
ATCATTTGGG ATCTCCGAAC CGCAATGAAT CGAGAAGACA TTGCTATTTG TGATGTCGGC
GCTCATAAGA TGTGGATGGC GCGTTTTTTC CGTTCCGAGC TGCCCAACAC CTGCATTATT
TCCAATGGTT TTGCCAGTAT GGGAATTGCG GTTCCTGGTG CGATTGGGGC AAAACTGGCT
TTCCCAGAAA AAGCCATTGT CGCCGTCACG GGAGATGCCG GTTTTATGAT GAACTCTCAA
GAAATTGAAA CGGCATTACG TTGCAACACC CCTATCGTGA TTCTGATTTG GAATGACAAT
CAATATGGGC TAATTAATTG GAAACAAAAA CGCCGTTATG GACGTTCTGC TTACATTGAT
TTCCAAAACC CTGATTTTGT GAAATACGCT GAATCATTTG GCGCCACCGG TGTTCGCATC
AATTCGGCCA ATGAATTGCT TCCGGCTTTA AAAACCGCCT TAAAGGCCAA TACGGTTACC
ATTATTGATT GTCCTGTCGA TTATTCGGAA AACGATCGTT TAACCGAATT ATTAGGGAAT
GTACTTTCAG AAATTGAATC CTAA
 
Protein sequence
MKASNLFVQC LENEQVEYVF GIPGEENMDM MDALLDSDIE FITCRHEQGA AFMADVYGRL 
TGKAGVCLST LGPGATNLVT GVADANMDNS PVVAIAGQAA TTRLHKESHQ VVDLVNLFKP
ISKYATQILE PETIPEVIRK AFKLAQAEKP GAAFIDFPEN VSEMLTPEKP LPVIQSRLSL
ADHKLIEKAA SIIQQAKKPL ILVGNGAVRA NASRQLEAFS KHYQIPLVNT FMAKGAVPHY
KNPLSVGTTG LQKGDYENGG FAESDLVICI GFDMVEYHPH LWNPNREHTI IHIDTCPAEV
DYSYIPDVEL IGNIGRNLSA LMEKLPHKEY EPIPFPLREA MIQEMERCSD SDAWPMKPQK
IIWDLRTAMN REDIAICDVG AHKMWMARFF RSELPNTCII SNGFASMGIA VPGAIGAKLA
FPEKAIVAVT GDAGFMMNSQ EIETALRCNT PIVILIWNDN QYGLINWKQK RRYGRSAYID
FQNPDFVKYA ESFGATGVRI NSANELLPAL KTALKANTVT IIDCPVDYSE NDRLTELLGN
VLSEIES