Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0051 |
Symbol | |
ID | 3762205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 62478 |
End bp | 64121 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637784757 |
Product | acetolactate synthase |
Protein accession | YP_390322 |
Protein GI | 78484397 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR02418] acetolactate synthase, catabolic |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAT CTAATCTCTT CGTACAATGT TTGGAAAACG AACAAGTCGA ATACGTCTTT GGCATTCCTG GCGAAGAAAA TATGGATATG ATGGATGCGT TATTAGATTC CGATATTGAA TTCATTACCT GTCGCCATGA ACAGGGAGCG GCATTCATGG CCGATGTTTA CGGTCGTTTA ACGGGTAAAG CCGGTGTTTG CTTATCCACC TTAGGGCCTG GTGCCACTAA CTTAGTGACC GGCGTTGCAG ACGCTAACAT GGATAATTCC CCTGTTGTCG CAATTGCCGG GCAAGCCGCC ACCACCCGTT TGCATAAAGA ATCGCATCAG GTCGTCGATT TGGTGAATTT ATTCAAACCA ATTTCTAAAT ACGCCACCCA AATATTAGAA CCTGAAACCA TTCCAGAAGT GATTCGAAAG GCGTTTAAAT TAGCTCAAGC AGAAAAGCCT GGCGCGGCAT TTATTGATTT TCCGGAAAAT GTCAGTGAAA TGCTGACGCC TGAAAAACCC TTACCGGTTA TTCAATCTCG TTTGTCATTA GCCGATCATA AATTAATTGA AAAAGCCGCC TCCATTATCC AGCAAGCTAA AAAACCGCTT ATCTTGGTTG GAAACGGCGC GGTTAGAGCG AATGCCAGCC GTCAATTGGA AGCCTTTTCA AAACATTATC AAATTCCCCT CGTGAATACC TTTATGGCAA AAGGCGCGGT TCCCCATTAT AAAAACCCTT TGTCAGTGGG CACCACAGGA TTACAAAAAG GCGACTATGA AAACGGTGGT TTTGCCGAAT CGGATTTGGT GATTTGTATT GGCTTCGACA TGGTGGAATA CCATCCTCAT TTATGGAACC CAAACCGGGA ACATACCATC ATTCACATTG ATACTTGCCC GGCCGAAGTC GATTACAGTT ATATTCCGGA TGTGGAACTC ATTGGAAATA TTGGTCGTAA TCTAAGTGCT TTAATGGAAA AGTTACCTCA TAAAGAATAT GAACCCATAC CGTTTCCATT AAGAGAAGCC ATGATTCAAG AAATGGAACG CTGTTCTGAC AGTGACGCCT GGCCAATGAA ACCACAAAAA ATCATTTGGG ATCTCCGAAC CGCAATGAAT CGAGAAGACA TTGCTATTTG TGATGTCGGC GCTCATAAGA TGTGGATGGC GCGTTTTTTC CGTTCCGAGC TGCCCAACAC CTGCATTATT TCCAATGGTT TTGCCAGTAT GGGAATTGCG GTTCCTGGTG CGATTGGGGC AAAACTGGCT TTCCCAGAAA AAGCCATTGT CGCCGTCACG GGAGATGCCG GTTTTATGAT GAACTCTCAA GAAATTGAAA CGGCATTACG TTGCAACACC CCTATCGTGA TTCTGATTTG GAATGACAAT CAATATGGGC TAATTAATTG GAAACAAAAA CGCCGTTATG GACGTTCTGC TTACATTGAT TTCCAAAACC CTGATTTTGT GAAATACGCT GAATCATTTG GCGCCACCGG TGTTCGCATC AATTCGGCCA ATGAATTGCT TCCGGCTTTA AAAACCGCCT TAAAGGCCAA TACGGTTACC ATTATTGATT GTCCTGTCGA TTATTCGGAA AACGATCGTT TAACCGAATT ATTAGGGAAT GTACTTTCAG AAATTGAATC CTAA
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Protein sequence | MKASNLFVQC LENEQVEYVF GIPGEENMDM MDALLDSDIE FITCRHEQGA AFMADVYGRL TGKAGVCLST LGPGATNLVT GVADANMDNS PVVAIAGQAA TTRLHKESHQ VVDLVNLFKP ISKYATQILE PETIPEVIRK AFKLAQAEKP GAAFIDFPEN VSEMLTPEKP LPVIQSRLSL ADHKLIEKAA SIIQQAKKPL ILVGNGAVRA NASRQLEAFS KHYQIPLVNT FMAKGAVPHY KNPLSVGTTG LQKGDYENGG FAESDLVICI GFDMVEYHPH LWNPNREHTI IHIDTCPAEV DYSYIPDVEL IGNIGRNLSA LMEKLPHKEY EPIPFPLREA MIQEMERCSD SDAWPMKPQK IIWDLRTAMN REDIAICDVG AHKMWMARFF RSELPNTCII SNGFASMGIA VPGAIGAKLA FPEKAIVAVT GDAGFMMNSQ EIETALRCNT PIVILIWNDN QYGLINWKQK RRYGRSAYID FQNPDFVKYA ESFGATGVRI NSANELLPAL KTALKANTVT IIDCPVDYSE NDRLTELLGN VLSEIES
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