| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0049 |
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| Symbol | |
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| ID | 3762203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 60490 |
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| End bp | 61665 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637784755 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_390320 |
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| Protein GI | 78484395 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00321304 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTACAA TGAATTCTTC TATGGAAATG GATCAATTAA AAAAGCCTTT TTCCATAAGT
GATATTATCT GGGCAGTCTT AGTCATTGCT GGAGCAGCTT ATGCCTGGCT AAGTTTTGGC
TCATTAATGG ATGCTTACGA AGTAGGAATC TTAGTGGGTA CATCTGTCGG TCTGATTGCT
TTAGGAAAAA TCTGGCCAAG TATCAAAACA TTGTCTTATG CGGTGGCCGC ATTAAGTTTA
CTGGCCTTGT GGACCTACAG TCATCATGGC AACCAAATCT CTGCCAATGA ACAAGCGTTC
TTTTTAAAGT TCTTAATTTC GAGCCAATCC GCTTTTATGT GGATGAGTGC GTTATTCGTA
TTGGCAACAG TTGCTTATTT TTTAGCGCTG TTTTCTAAAT CAAATTATGT TGGTAAAGTA
GCCAGTGCCA TTGCGTGGTC AGGTGTTGCT TTTGGACTGG TTGGCATGAT GGTTCGCTGG
CGCGAATCTT ATCTCATCAA CCCAGATTAC GGTCATATTC CGGTCAGCAG TCTATATGAA
GTCTTTATCT TATTTGCGGT ACTGACAACC CTAATTTATT TGTATTACGA ACAAAAATTG
CGTACCCGTT CAATGGGTGG ATTTGTCATG CTGATTGTCA GTGCCTCAAT TGCTTTCTTA
CTTTGGTATA CCTTTGATCG TGAAGCACAC GTGATTCAAC CATTGGTACC GGCATTAAAA
AGTTATTGGA TGAAAATTCA TGTCCCTGCC AATTTCGTTG GGTATGGTGC TTTTTCAATC
GCGGCCATGG TCGGTTTAGC TTACTTAATC ACTGAAAAAT TCCAAACCAA AAATCCTAAT
TCACAATTTG TGAAATCGAT GCCTAGCTTG GAAAGCATGG ATGATCTAAT GTACAAAACC
GTTGCATTAG GCTTTGCTTT TTTTACCATT GCAACCGTTT TGGGCGCAAT GTGGGCCGCC
GAAGCATGGG GTGGTTATTG GTCTTGGGAT CCAAAAGAAA CTTGGGCTCT GATTGTTTGG
TTAAACTATG CTGCTTGGTT ACATATTCGT ATGTCAAAAG GCTGGCGTGG TCGTCCAATG
GCATTATGGG CTCTAGTCGG TTTATTAGTA ACCACATTTG CTTTCTTAGG CGTCAATATG
TTCCTATCCG GTCTTCATTC GTACGGTGAG CTTTAA
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| Protein sequence | MSTMNSSMEM DQLKKPFSIS DIIWAVLVIA GAAYAWLSFG SLMDAYEVGI LVGTSVGLIA
LGKIWPSIKT LSYAVAALSL LALWTYSHHG NQISANEQAF FLKFLISSQS AFMWMSALFV
LATVAYFLAL FSKSNYVGKV ASAIAWSGVA FGLVGMMVRW RESYLINPDY GHIPVSSLYE
VFILFAVLTT LIYLYYEQKL RTRSMGGFVM LIVSASIAFL LWYTFDREAH VIQPLVPALK
SYWMKIHVPA NFVGYGAFSI AAMVGLAYLI TEKFQTKNPN SQFVKSMPSL ESMDDLMYKT
VALGFAFFTI ATVLGAMWAA EAWGGYWSWD PKETWALIVW LNYAAWLHIR MSKGWRGRPM
ALWALVGLLV TTFAFLGVNM FLSGLHSYGE L
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