Gene Tcr_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0036 
Symbol 
ID3760362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp44664 
End bp45698 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content50% 
IMG OID637784742 
Productribosome-associated GTPase 
Protein accessionYP_390307 
Protein GI78484382 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAC ATTATTCTCT TCATCAATTA GGGTGGAAAC CCTTTTTTCA ACACCAACTG 
TCACTTTATG AGTTGGAAAC CTTGATTCCG GCGCGTGTCT TTGGCATCGA ACGTTCGATT 
ATCCAGTTAT TGACCACCGA AGGTCCGTTG TCCATGGCGA TGACACAATC CATTCCGAAT 
CTGGCGGTGG GCGACTGGAT TTTAATCGAT GCTCAGCATC GGTTTGTTCG CTTGTTGGAC 
AGGGCGTCGT TGTTTTCGCG AAAGGCAGCG GGTACAAGGG TTGACCGCCA ACTGATTTCC 
GCCAATGTGG AGTCGGTTTT GATTGTCAGT TCTCTGAACA ACGACTTTAA TTTGAACCGG 
ATTGAGCGTT ATTTAGCGTT GGCGCATGAA GCTGGTGTAG AACCGATTGT TTTGCTTACC 
AAAGCCGATT TATGCGATGA TCCCGAATCG TTTGTCGAAG CGGTTCAAGA GTTGGCTCAG 
ATGCTGCCGG TGTTTGCGGT CAATGCTCAT GATTGGGCGA CTTTGCAAAC GCTCGAAATG 
TGGCTGTCGC CAGGCCATAC TCTGGCTTTT TTTGGGTCGT CCGGCGTGGG AAAATCGACG 
TTGGTGAACA CGCTATTGGG CGGTGAAGTG CAGGAAACCA ATCAAGTTCG TGAAGATGAC 
AGCCGAGGGC GTCACACCAC GACAGCCCGT TCGCTGCATT TGACGGCTTC TGGCGTGTTG 
TTGTTGGACA CGCCGGGCAT GCGAGAGTTG CAATTGGCGG ATTGCGAACA GGGCGTAGAG 
GAAACCTTTG CAGACATTGC ATCTTTGGCG ACGCGGTGTA AGTTTTCTGA TTGCCAGCAT 
GAATCTGAAC CGGGGTGTGC GGTTCAGGCT GCGATTCAAT CCGGGCAGCT GGCAGAGCGC 
CGCTTGGTGA ATTATCATAA GTTGATGAAG GAGCAAGCGT TTAATGCCGT TACTTTGGCG 
GAGAAACGTG CAAAAGACAA GCGATTCAGC AAGTTGGTTA AATCCGCCAA AAATATCAAG 
CAACAACCTA CATAA
 
Protein sequence
MTPHYSLHQL GWKPFFQHQL SLYELETLIP ARVFGIERSI IQLLTTEGPL SMAMTQSIPN 
LAVGDWILID AQHRFVRLLD RASLFSRKAA GTRVDRQLIS ANVESVLIVS SLNNDFNLNR 
IERYLALAHE AGVEPIVLLT KADLCDDPES FVEAVQELAQ MLPVFAVNAH DWATLQTLEM 
WLSPGHTLAF FGSSGVGKST LVNTLLGGEV QETNQVREDD SRGRHTTTAR SLHLTASGVL 
LLDTPGMREL QLADCEQGVE ETFADIASLA TRCKFSDCQH ESEPGCAVQA AIQSGQLAER 
RLVNYHKLMK EQAFNAVTLA EKRAKDKRFS KLVKSAKNIK QQPT