Gene Tcr_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0033 
Symbol 
ID3760359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp40487 
End bp41740 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content45% 
IMG OID637784739 
Productsulfonate ABC transporter, periplasmic sulfonate-binding protein, putative 
Protein accessionYP_390304 
Protein GI78484379 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCAAT ATTGCAACTG TGATCAAGAA TCATCAGAAC TAGACTATCA ATTTAACCCG 
GCTAAAGGGC GTCGTGAGTT TATTCTCGAT AGCCTTGCTA CTGCTGGGGG ACTGGCGGCT
GCCATGAGTT TACCCTCGCA AGCATTTGCC AACATGACAC CTCCGGAGGA CGAAGTTGTC
CGAATTGGTT ATCTCCCGAT CACAGACGCC AGTGCACTTT TGGTTGCGCA TGCCATGGGC
TTTTTTGAAG ATGAAGGATT AAAAGCCGAA AAGCCAACCT TGATCCGTGG CTGGTCTCCT
TTGATTGAAG GGTTTGCGGC ACACAAATTT AATTTGGTGC ATTTTTTAAA GCCGATTCCT
ATTTGGATGC GCTACAACAA CAATTTCCCA GTCAAAATTA CAGGTTGGGC ACATACCAAT
GGATCTGGTT TAGTGGTCGG AAGACACACC GGAGTCAACT CTTTTGAAGA ACTTGGTGGT
ATGCAAATAG CCGTTCCATA CTGGTATTCA ATGCATAATA TTGTCTTGCA GATGGCTTTG
AAAAATGCCG GGCTTGAACC TGTAATCCAG GATCAAACAG ACCCACTCAA ACCAAACCAA
GTCAACTTAC AAATCATGCC ACCACCAGAC ATGCCACCTG CTTTAGCTGC GAAAAAGATC
GACGCTTATA TCGTGGCCGA ACCATTCAAT GCCGCTGGAG AAGTCTTAGC CGGTGCAAAA
ATGCTGCGCT TTACAGGGGA TATCTGGCAA AACCATCCAT GTTGTGTGGT GTGTATGCAT
GATAATGATG TCGACAAACG TCCAGAATGG TCGCAAAAGG TCATGAACGC TGTGGTAAGA
GGCGCTTTAT ATGCCCAAGA GAATAAAGAA GAAGTTGCCA AAATGTTGTC CCGTGAAGGA
AAACGTTATC TGCCGATGAA AGCCAAAGTG GTTCTAAAAG CAATGACGGA TTATTCACCA
GCGCATTATG AAGATCCTAA AGCGATTAAA CATCCGGACT GGGATGTAGG CCGTATCGAT
TTCAACCCTT ACCCTTACCC GTCAGCAACC AAATTCATCG TTGACCAACT GAAGGAAACA
CTGGTTACGG GTGATAAAAC CTTCTTGAAT AATCTAGATA CGGACTTCGT CACAAAAGAC
TTAGTCAACT ACGATTATGT CAAAAATGCC ATGGACAAAT ATGACGTCTG GGATAAGGTC
AGAGGAGTCA ATATGGATGA TCCTACCCAT CGAGAAGAGG TGTTCAAGTT ATGA
 
Protein sequence
MCQYCNCDQE SSELDYQFNP AKGRREFILD SLATAGGLAA AMSLPSQAFA NMTPPEDEVV 
RIGYLPITDA SALLVAHAMG FFEDEGLKAE KPTLIRGWSP LIEGFAAHKF NLVHFLKPIP
IWMRYNNNFP VKITGWAHTN GSGLVVGRHT GVNSFEELGG MQIAVPYWYS MHNIVLQMAL
KNAGLEPVIQ DQTDPLKPNQ VNLQIMPPPD MPPALAAKKI DAYIVAEPFN AAGEVLAGAK
MLRFTGDIWQ NHPCCVVCMH DNDVDKRPEW SQKVMNAVVR GALYAQENKE EVAKMLSREG
KRYLPMKAKV VLKAMTDYSP AHYEDPKAIK HPDWDVGRID FNPYPYPSAT KFIVDQLKET
LVTGDKTFLN NLDTDFVTKD LVNYDYVKNA MDKYDVWDKV RGVNMDDPTH REEVFKL