| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0028 |
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| Symbol | |
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| ID | 3760354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 34387 |
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| End bp | 35154 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637784734 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_390299 |
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| Protein GI | 78484374 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACCC ATTTCCCAAT AGAAACGATC AAATCCGGCT GTTCTCAGTG TCATACTCCG
CTAGGATTTG AGTTTACCTT TGCGTTTCAA CCGATTATTC ATGTTTTTAA CAAGGAAATA
TGGGGATATG AAGCCTTGGT TCGCGGCCTG GAAGAAAAAA CCGCTTGGAG TGTTTTAAAG
CGGGTAAACG ATGATAACCG TTATGCTTTT GATCAAGCTT GCCGAACCAA GGCCATTGCA
CTCGCCAGTC AATTAAAGTT AGATAAAATG TTGAGTATCA ATTTTTTACC GAATGCGGTT
TATGAACCAA AACATTGTAT TCAAAGTACG TTAAAGGCGG CTAAAGAACA TCAATTTCCA
TTAGAAAAAA TCATGTTTGA AATCACCGAG TCAGAGCAGG TGGTGGATCG AGCTCATCTG
ACGAATATTT TTGAATATTA TCAATCTCAA GGCTTTACCA CTGCGTTGGA TGATTTTGGA
GAAGGCCATG CGGGCTTGAA TATGTTGGCC AGTTTTGTAC CCAATATTTT AAAAATTGAT
ATGGAACTGG TAAAGAACGT TGATCAAAGT CCGGTTAAGC AAGCGATTAC AAAAAATTTA
ATTCAAATGT GCAATGATCT TAATGTCACG GTATTAGCCG AAGGAATAGA ACGGATTGAA
GAAGTGAACT ATTTTAAAGA TCTTGGCGTG CCATTAATGC AAGGTTATTT CTTCGCTAAG
CCAGGTTTTG AGAATTTACC AACAGTGAAT TTTTCATCGT TAGATTAA
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| Protein sequence | MTTHFPIETI KSGCSQCHTP LGFEFTFAFQ PIIHVFNKEI WGYEALVRGL EEKTAWSVLK
RVNDDNRYAF DQACRTKAIA LASQLKLDKM LSINFLPNAV YEPKHCIQST LKAAKEHQFP
LEKIMFEITE SEQVVDRAHL TNIFEYYQSQ GFTTALDDFG EGHAGLNMLA SFVPNILKID
MELVKNVDQS PVKQAITKNL IQMCNDLNVT VLAEGIERIE EVNYFKDLGV PLMQGYFFAK
PGFENLPTVN FSSLD
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