Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0023 |
Symbol | |
ID | 3760388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 26823 |
End bp | 27452 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637784729 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_390294 |
Protein GI | 78484369 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACTCG ATACATTTAT TTCTTTTACC TTGGTGATGT TCTTACTGGC GCTGTCTCCG GGCCCAGATA ATCTTTATGT TTTGATGCAA TCGGCTCTTT ACCGGCCCAT GGCCGGTATT TGGGTAATTC TTGGCTTATG TACGGGATTA ATCGCTCATA CACTGGCCGC GGCATTTGGT ATTACCATCC TCTTCCAAAC CTCTGAAATC GCCTTCACAT TGTTAAAATT ATTGGGCGCA GGCTATCTGC TCTTTCTGGC GTGGAAAAGC TATCAGGCCG GTGCGCTTCA TCTAAAAAAT AACGCTGTCA GTGCCTTGTC TGCATCTCAA TTGTATCAAC GTGGCGTTTG GATGAATCTG ACCAACCCGA AAGTTTTTAT TTTCTTTCTA GCGTTATTGC CACAGTTCAT TGACACAAAC GCCAGCTCAG TCGCCCAGCA AATGTTCATG CTAGGCGGCA TCGCTATTCT GGTCACGCTC ATAGTATTCA GCGGACTTGC CGTTTTGGCC GGATTTGCAA AAAACTGGAT TCAATCTGAC AAGAAACAGC GTGTCTTACA TCAAATAGCA GCAGTGGTTC TGGTGCTCAT TGCACTCAAA CTCTTAATCA GCCTGCCATA TGGTCTTTAA
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Protein sequence | MPLDTFISFT LVMFLLALSP GPDNLYVLMQ SALYRPMAGI WVILGLCTGL IAHTLAAAFG ITILFQTSEI AFTLLKLLGA GYLLFLAWKS YQAGALHLKN NAVSALSASQ LYQRGVWMNL TNPKVFIFFL ALLPQFIDTN ASSVAQQMFM LGGIAILVTL IVFSGLAVLA GFAKNWIQSD KKQRVLHQIA AVVLVLIALK LLISLPYGL
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