| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0021 |
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| Symbol | |
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| ID | 3760386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 25085 |
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| End bp | 26356 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637784727 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_390292 |
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| Protein GI | 78484367 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAC CAATTCTTTT CAATACAAAT AACCTTCTCA CAATCAGTGC CTTTATATTA
GTATTGTTTT TGGTTTCAAT TCTCGTTTTC AGTGCCAAAC AATTAACCAA CAACACCTTA
GAACATACTT CACAGATTAT TGTTTCTCAG TACAAGAAAC TCCATAATTT ACTCAACTTG
CATATCCACG GCCAAAAGCG GACGATTCAA TTGGAACGTA TTTACCTGCA AGAAGACCCT
TTTGAAAAAG ATGCCGCGTT AATGGACTTC TACCGAGACG GTGGAAATTA TATGATCTAC
CGTAACCAAT TAGCGCTTTT AGTCAGTGAC AACCCTGCTG AAACCAAATG GTTGGAAGAA
ATGAATGCCT TGGCTCGAGT GACCTCTCCC ATACAAGAAC GCGTGGCACA ACTGGGGATG
AAAGGTGATG AGGAAAAAGG TAGAGAGCTT CTCATGAATC AAGCCCTTCC TCGCCTAGAA
AAGTTTAGCC AAAGGGTCAA TGAATTTTCG TTGTTTCAAG CTCAGGAAAT GAAAAACCTT
ATTGCGGACT CTAAAGTCCG CGTGGATAAA TTGATGCACA ACATCGTCAC AGTGGCAGGC
TTATTAATTT TAGTGAGTTT GGCTTTTGCA ATGATGGTTA CACGTAAATT CAATCACATC
AATCAACAAC TCAAAATCAG TAATGGAACG CTGGAAAAAG AAGTACGCTC CCGCACTCAA
AAACTCAGCC AGGCAAGAGA AGACCTCCTG CATAAAAATA AAATACTGGA GCAACTGTCC
ACCACCGACC CATTAACCCA GCTGTGTAAC CGTTTAAAAA TCGAACGTGT TTTGGAAGAT
TTGCATCAAA AATACGAAGA CGAACAACAA ATATACAGCT TATTGCTGAT TGATATTGAT
TGCTTTAAAA AGGTCAATGA CACTTATGGG CATACTGTGG GTGATGAGGT GTTGAAAGAA
CTGTCAGAGC GGCTTAAACA ATCCTTTACC CAACATGGTC ACATTGGACG ATGGGGCGGA
GAGGAATTCA TTGTCATCTT AGAAAACGAA ACCTTGGAAC AAGCCGTAGT TGCAGCGGAA
ACATTCCGTC AAAAAACAGA AAACACCTCA TTTATTGAAG TGGGTAACCT CACCGTCAGT
ATCGGCGTGG CAACGGTAAC ATCCGCCCAA ACCATTTCCG AACTCATTCA TTCTGCCGAC
TTAGGACTTT ATGAATCCAA ACACGCAGGT CGTAATCGTG TGACCGTTTA TTCAAATGGC
GATTCCGCTT AA
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| Protein sequence | MIKPILFNTN NLLTISAFIL VLFLVSILVF SAKQLTNNTL EHTSQIIVSQ YKKLHNLLNL
HIHGQKRTIQ LERIYLQEDP FEKDAALMDF YRDGGNYMIY RNQLALLVSD NPAETKWLEE
MNALARVTSP IQERVAQLGM KGDEEKGREL LMNQALPRLE KFSQRVNEFS LFQAQEMKNL
IADSKVRVDK LMHNIVTVAG LLILVSLAFA MMVTRKFNHI NQQLKISNGT LEKEVRSRTQ
KLSQAREDLL HKNKILEQLS TTDPLTQLCN RLKIERVLED LHQKYEDEQQ IYSLLLIDID
CFKKVNDTYG HTVGDEVLKE LSERLKQSFT QHGHIGRWGG EEFIVILENE TLEQAVVAAE
TFRQKTENTS FIEVGNLTVS IGVATVTSAQ TISELIHSAD LGLYESKHAG RNRVTVYSNG
DSA
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