| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0020 |
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| Symbol | |
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| ID | 3760385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 23428 |
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| End bp | 24573 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637784726 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_390291 |
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| Protein GI | 78484366 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGCAG CACGGAAACT ACGTTCAATC GTTACGAGTA AACCCATCCT ATTTTTAAGT
GGCATCGTCA CTCTGGTTGC AATCATTTCC GCATCAATCT TTTTAACGTC TGGCGCAACC
CCTCCGCCAA AAAAAGCGGT TTCAAGCCAA TCGTCTGTTG AAAACTCAGA CAGCGCGGTG
ATTTTAATTT ACCACCATTT TGGGAAAGAT GAATATCCCA GCACCAATAT TCGCTTAGCG
CAACTGGATG CTCAACTCAA CTACCTTGAA CAAAACCATT TTACTGTCTG GTCGTTATCC
CAATTAGTCA ACACATTAAA AAGCCGAGCA CCTATTCCAA ATAAAACCGT GGTTTTTACC
ATTGATGATG CTTGGTCCAG CGTTTATACA GAAGCCTTCC CACGGTTTAA AAAACGAGGC
TGGCCCATGA CGATTTTTGT AAATACCGAT GCGATCGATA AAGGTTACCA ATCGAATATG
ACTTGGGAAC AAATGCGAGA AATGCAGCAA TATGGTGCGG AATTCGCCAA TCATGCTAAA
ACGCATCAAA AATTGGTGCG ACAGCCAGAT GAATCTCATG AGGCTTGGCA GACGCGGGTC
ACACAGGAAA TTAAGGTGGC GCAACAACGC TTAAAGTCGG AACTTGGAGA AAACACCAAT
CAAACCAAAT TGTTGTCTTA TCCTTACGGC GAATACTCTG AAGCCTTAGC CAACCTTGTT
CAAAAAATGG GCTATGTTGG CATTGCTCAA AACTCGGGCG CTGTTGGATA TCAATCTGAT
CTAAGAGCCC TCATGCGCTT TCCAATGAGT GAAGTTTATG CCGACATGGA CGCCTTCAAA
TTAAAGGTCA ATACCCATGT TTTTCCGGTC AAAAAAATCA CGCCTTTTGA TCCGGTCATC
ACTGAAAACC CTCCTAAACT GATTTTAGAG TTCACCAGCC CTCCTCAGCG CAACATTCAA
TGTTTTAACC AGCATGGCGA GCCTTTGTTG CTCGATTGGG CCAGCGAAAC CAAATTAGAA
ATCACCAGTG ATTCCCCACT GGAGCCCCCT CGAAGCCGTT ATGCCTGTAC CCAAATGATG
CCCAATGGCG ATTGGCGCTG GATAAGCCAT AGTTGGGTTA TTTCCCATAC AAACAACATG
GATTAA
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| Protein sequence | MSAARKLRSI VTSKPILFLS GIVTLVAIIS ASIFLTSGAT PPPKKAVSSQ SSVENSDSAV
ILIYHHFGKD EYPSTNIRLA QLDAQLNYLE QNHFTVWSLS QLVNTLKSRA PIPNKTVVFT
IDDAWSSVYT EAFPRFKKRG WPMTIFVNTD AIDKGYQSNM TWEQMREMQQ YGAEFANHAK
THQKLVRQPD ESHEAWQTRV TQEIKVAQQR LKSELGENTN QTKLLSYPYG EYSEALANLV
QKMGYVGIAQ NSGAVGYQSD LRALMRFPMS EVYADMDAFK LKVNTHVFPV KKITPFDPVI
TENPPKLILE FTSPPQRNIQ CFNQHGEPLL LDWASETKLE ITSDSPLEPP RSRYACTQMM
PNGDWRWISH SWVISHTNNM D
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