Gene Tcr_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0011 
Symbol 
ID3760376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp12559 
End bp13596 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content48% 
IMG OID637784717 
Producthypothetical protein 
Protein accessionYP_390282 
Protein GI78484357 
COG category[S] Function unknown 
COG ID[COG3016] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.113943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGCTT TAGGTTTTCT GACCTTTTTA AGCGCCAGCC TGTTACTGAC AGGCTGTGCT 
CATTCTCCCC CGCACTTGGA TCAAACCAGC TCTGCGCGGA CCATACCGGA TTTACCGGCA
CTCAAAACAC TGTACGAGTA TCGTTTGATT GAGGCTCAGA GCAAAAAAGC GATCACCTTG
AACCAACTGA CAAAACAACT CAAAGACAAA GATGTCATCT TTATCGGCGA GTTTCATGGC
AATCAGGCAT CTCATTTGCT GGAAGCACAA CTACAAGCTG CGCTTTATCA ACAACGTCCT
AACCAGATTC TCTCAATGGA ACAATTTAAT CGCGACCAAC AAGCGATTTT AAACCGTTAC
TTGGAGGGAA GCATCGGTGA AAAGACATTG ATTAAAGACG CACCAACCTG GCCAAATTAT
GCCGGCAGTT ATCGGCCGAT GATTGAATTC GCCAAACAAC AATTTTTACC AGTGGTGGCT
GCGAATGCGC CGGCACAAAC GGTACGCTGT GTGGGTCGAC AGGGCACAGA CTATTTGCAA
AAACTATCTC ACACAGAAAG GCATTTGATC GCCAAGGATC CTTTTCACTC CACACCGGCT
TATAACGAAA AATTTCAACA GTTTTTAGCC GACCAAACGG GCCCGGCACA CGCGGCAAAA
AACACTGATG AACACACCCC AAATAATCGT TATATGGCGC AGCTTTTACG CGACAACACC
ATGGCAGAAA GCATCAATCA GGCTTTACAA CAATCGCCTA AAGCTCAGGT GCTGCATTTG
AATGGCGCCT TTCATAGCAA TAACGCCTTA GGGACGGTCG CCGCCCTAAA AAGACTCAAC
CCATCCCTGA ACATTGCGGT GATCAGTCCG GTTCGCGTGA CCGACCCAGA AACGCCTACC
TTTACGCAAA CGGATTTAAC ACTGGGGGAC TTTATCTACC TAATTCAGTC GCAACCGACT
GATTACGTCC AAGCCTCCAA GCGCCAAGCC GCTTTTAAAG CCATGTTTAC GCATGCTTCA
CAGAAAACAT GTCGTTAA
 
Protein sequence
MRALGFLTFL SASLLLTGCA HSPPHLDQTS SARTIPDLPA LKTLYEYRLI EAQSKKAITL 
NQLTKQLKDK DVIFIGEFHG NQASHLLEAQ LQAALYQQRP NQILSMEQFN RDQQAILNRY
LEGSIGEKTL IKDAPTWPNY AGSYRPMIEF AKQQFLPVVA ANAPAQTVRC VGRQGTDYLQ
KLSHTERHLI AKDPFHSTPA YNEKFQQFLA DQTGPAHAAK NTDEHTPNNR YMAQLLRDNT
MAESINQALQ QSPKAQVLHL NGAFHSNNAL GTVAALKRLN PSLNIAVISP VRVTDPETPT
FTQTDLTLGD FIYLIQSQPT DYVQASKRQA AFKAMFTHAS QKTCR