Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0011 |
Symbol | |
ID | 3760376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 12559 |
End bp | 13596 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637784717 |
Product | hypothetical protein |
Protein accession | YP_390282 |
Protein GI | 78484357 |
COG category | [S] Function unknown |
COG ID | [COG3016] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.113943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGTGCTT TAGGTTTTCT GACCTTTTTA AGCGCCAGCC TGTTACTGAC AGGCTGTGCT CATTCTCCCC CGCACTTGGA TCAAACCAGC TCTGCGCGGA CCATACCGGA TTTACCGGCA CTCAAAACAC TGTACGAGTA TCGTTTGATT GAGGCTCAGA GCAAAAAAGC GATCACCTTG AACCAACTGA CAAAACAACT CAAAGACAAA GATGTCATCT TTATCGGCGA GTTTCATGGC AATCAGGCAT CTCATTTGCT GGAAGCACAA CTACAAGCTG CGCTTTATCA ACAACGTCCT AACCAGATTC TCTCAATGGA ACAATTTAAT CGCGACCAAC AAGCGATTTT AAACCGTTAC TTGGAGGGAA GCATCGGTGA AAAGACATTG ATTAAAGACG CACCAACCTG GCCAAATTAT GCCGGCAGTT ATCGGCCGAT GATTGAATTC GCCAAACAAC AATTTTTACC AGTGGTGGCT GCGAATGCGC CGGCACAAAC GGTACGCTGT GTGGGTCGAC AGGGCACAGA CTATTTGCAA AAACTATCTC ACACAGAAAG GCATTTGATC GCCAAGGATC CTTTTCACTC CACACCGGCT TATAACGAAA AATTTCAACA GTTTTTAGCC GACCAAACGG GCCCGGCACA CGCGGCAAAA AACACTGATG AACACACCCC AAATAATCGT TATATGGCGC AGCTTTTACG CGACAACACC ATGGCAGAAA GCATCAATCA GGCTTTACAA CAATCGCCTA AAGCTCAGGT GCTGCATTTG AATGGCGCCT TTCATAGCAA TAACGCCTTA GGGACGGTCG CCGCCCTAAA AAGACTCAAC CCATCCCTGA ACATTGCGGT GATCAGTCCG GTTCGCGTGA CCGACCCAGA AACGCCTACC TTTACGCAAA CGGATTTAAC ACTGGGGGAC TTTATCTACC TAATTCAGTC GCAACCGACT GATTACGTCC AAGCCTCCAA GCGCCAAGCC GCTTTTAAAG CCATGTTTAC GCATGCTTCA CAGAAAACAT GTCGTTAA
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Protein sequence | MRALGFLTFL SASLLLTGCA HSPPHLDQTS SARTIPDLPA LKTLYEYRLI EAQSKKAITL NQLTKQLKDK DVIFIGEFHG NQASHLLEAQ LQAALYQQRP NQILSMEQFN RDQQAILNRY LEGSIGEKTL IKDAPTWPNY AGSYRPMIEF AKQQFLPVVA ANAPAQTVRC VGRQGTDYLQ KLSHTERHLI AKDPFHSTPA YNEKFQQFLA DQTGPAHAAK NTDEHTPNNR YMAQLLRDNT MAESINQALQ QSPKAQVLHL NGAFHSNNAL GTVAALKRLN PSLNIAVISP VRVTDPETPT FTQTDLTLGD FIYLIQSQPT DYVQASKRQA AFKAMFTHAS QKTCR
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