Gene Tbis_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_2942 
Symbol 
ID9169459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3452151 
End bp3454160 
Gene Length2010 bp 
Protein Length669 aa 
Translation table11 
GC content76% 
IMG OID 
Product5-oxoprolinase 
Protein accessionYP_003653533 
Protein GI296270901 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGG TCATCGGAGT GGACGTCGGC GGAACCTTCA CTGACCTTGT CCTGCACGAC 
GCGGCGACCG GGGACATCAG GGTCGCCAAG CGGCCGACCA CCCCGGCGGC GCCCGAGCTC
GGGGTGCTCG GGGCGGTCGA CGCGGCCGTC TCCGCCGAGC AGCTCGCGCG CTGCCGCCAC
TTCGTCCACG GCACGACGGT CGGCTTGAAC GCGCTGCTCG AGCGCGCCGG CGCCCAGGGT
CCGACCGTTG GCCTGATCAC CACGGCCGGC TTCCGCGACG TGCTGGAGAT CCGGCGCGGT
GACCGGGACG ACCCGTACGA CCTGTTCTGG ACCCCGCCGC CCCCGCTGGT CCCGCGGCGG
CTCCGCACCG AGGTGCTGGA GCGGGTGGCG GCCGACGGCT CCATCGTGCG CGAGCTCGAC
CCCGAGAGCG TACGGCGGGC CGCCCGGCTG CTGATGGACG AGGGCGTGGA CGCGATCGCG
ATCGTGCTGA TCAACTCCTA CGCCAACCCG GAGCACGAGC TGCGCACGGC CGAGCTGGTC
CGCCAGGCCG GGTTCACCGG GCCGATCTCG CTCTCCCACG AGGTGTCGGG GGAGTACCGG
GAGTACGAGC GGACCTGCAC CACGGTCGTG GACGTCCTCG TGCGCCACCG GATGGGGCCG
TACCTGCGGA ACCTCGAGGC CGAGCTGCGC CGGCGCGGGT TCACCGGCGA GCTGCTCATC
ACCCGGTCCG GGGGCGGCGC GCTCACCATC GCCGAGGCGA TGGCCCGGCC GTTCGAGACG
ATCCTCTCCG GCCCGGTCGC CGGGGCGGTG GCCTCCGCCC GGCTCGCCGG GACCCTCGGC
CTCGGCACGG TGATCGCCGC CGACGTGGGC GGCACCAGCT TCGACACCAC CCTGATCGTC
GACGGCACCC TCCCCCTGCT CTTCCAGGGC GAGGTGGTGG GGCTGCCCCT GCAGAGCCCG
TGGGTGGACG TGCGGTCCAT CGGCGCCGGG GGCGGCTCGA TCGCGTACGC CGACCACGGC
GGCCTGCTCC GGGTCGGGCC GCGGAGCGCC GGCGCCGACC CCGGGCCGGT CTGCTACCAG
CGCGGCGGGA CCGAGCCCAC GGTCACCGAC GCGGCGCTGC ACCTCGGCAT GATCCCCACC
GACCGCCTCT CCGGCGGGAT CACGCTCTCC GCGGAGAAGG CGGCGGCCGC GCTCGCCAGG
CTCGCCGGGC CGACCGGGAT CGACCGGGTG GACGCGGTGG CCGAGGGCGT GATCCGGATC
GCCGCCGCCC ACATGGCCCA GGCGGTCCGC GGCATCACGG TCGAGCGCGG GGTGGACCCG
CGCGGCGCGG CGATCGTCGC GTTCGGCGGG GCCGGCCCGC TCTTCGGCTG CCTGCTCGCC
GACGAGCTCG ACGTGGACAC CGTGGTGGTG CCGCCCAACG CGGGCAACTT CTCCGCCGTC
GGCCTGGTCC AGGCGGACAT CGTCCGCTCC GCCGCCCGGA CCCTGGTCCG CCCGCTCGAC
GACGCCGCGC TCCCGGAGAT CGAGCGGCTC GCCGGCACGC TCTTCGAGCG GCTGGCCCAG
GAGGGCGAGG TCCGGGAGCT CCACCTCGAC CTGCGCCACC GCGGCCAGGA GCACACGCTC
ACCATCCCGG TGCTGCTCGG GCGGGACGAC GTGGCCGCGA TCCGGGCGCG GTTCACCGAC
GCCTACCACC GCGCCTTCGG CCACCGGCTC CCCGACCCGC TCGAGGTGGT CACGGTGCGG
GCCACGAGCC GGGTGGTGCT CGACGGCACG CGCTCGCTGA TCCCGGTCCC GCCGTCCGGG
GAGACGGCGT CCGGGACCCG GCGGCTCTGG TCGTTCCGGT CGCGCGCCTG GGTCGAGGCG
CCGGTGGTGC CGAGGTCCGG GCTGACCGGG CCGATCGCGG GGCCGGCCCT CGTGGCCGAG
CCCACGACGA CCACCTACCT CGACGCGGGC TTCATCGCCG AGCCGCACCC GACCGGGTGC
CTCATCATCA CCAGGAAGGA CCGCGGATGA
 
Protein sequence
MATVIGVDVG GTFTDLVLHD AATGDIRVAK RPTTPAAPEL GVLGAVDAAV SAEQLARCRH 
FVHGTTVGLN ALLERAGAQG PTVGLITTAG FRDVLEIRRG DRDDPYDLFW TPPPPLVPRR
LRTEVLERVA ADGSIVRELD PESVRRAARL LMDEGVDAIA IVLINSYANP EHELRTAELV
RQAGFTGPIS LSHEVSGEYR EYERTCTTVV DVLVRHRMGP YLRNLEAELR RRGFTGELLI
TRSGGGALTI AEAMARPFET ILSGPVAGAV ASARLAGTLG LGTVIAADVG GTSFDTTLIV
DGTLPLLFQG EVVGLPLQSP WVDVRSIGAG GGSIAYADHG GLLRVGPRSA GADPGPVCYQ
RGGTEPTVTD AALHLGMIPT DRLSGGITLS AEKAAAALAR LAGPTGIDRV DAVAEGVIRI
AAAHMAQAVR GITVERGVDP RGAAIVAFGG AGPLFGCLLA DELDVDTVVV PPNAGNFSAV
GLVQADIVRS AARTLVRPLD DAALPEIERL AGTLFERLAQ EGEVRELHLD LRHRGQEHTL
TIPVLLGRDD VAAIRARFTD AYHRAFGHRL PDPLEVVTVR ATSRVVLDGT RSLIPVPPSG
ETASGTRRLW SFRSRAWVEA PVVPRSGLTG PIAGPALVAE PTTTTYLDAG FIAEPHPTGC
LIITRKDRG