Gene Tbis_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_2139 
Symbol 
ID9168641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2486953 
End bp2488377 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content68% 
IMG OID 
Productfamily 10 glycoside hydrolase 
Protein accessionYP_003652743 
Protein GI296270111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.200641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTC GATCACCTAG ACGCCACGCC TGGAAGATCG GACTGGCGCT GCTGATCGGC 
GTGATCCCGG CGGTCGCCAC CGCCACCACC GCCGACGCGG CCGCGCCGCT CCGCCAGCTC
GCCGAGGCCA AGGGCATCTA CTTCGGCACG GCGGTCGCGG CCAACCGGCT CGGCGAGAGC
CAGTACGTCC AGGTCCTCGA CCGCGAGTTC AACTCCGTCA CCCCTGAGAA CGAGATGAAG
TGGGACGCCA CCGAGCCGTC CCGCAACTCG TTCAACTTCG GCAGCGCGGA CCAGATCGTC
AACCACGCCC AGGCCAACGG GCAGATCATC CGCGGCCACA CCCTCGTCTG GCACAGCCAG
CTCCCGTCGT GGGTGAGCAA CGGCAACTGG ACCGCCAGTG AGCTCACCCA GGTCATGGAG
AACCACATCT CCAACGTGGC CGGCCGCTAC CGCGGCAAGC TCTACGCCTG GGACGTCGTC
AACGAGGCCT TCAACGAGGA CGGCACCCGC CGCCAGACCG TCTTCCAGCG GGTGCTCGGC
GACGGCTACA TCGCCACGGC GTTCCGGGCC GCCCGGGCCG CCGACCCCAC GGCCAAGCTG
TACTACAACG ACTACAACAT CGAGGGGATC AACGCGAAGA GCAACGCCGT CTACAACATG
GTGCGCCAGT TCAAGCAGCA GGGCGTGCCC ATCGACGGCG TGGGCTTCCA GGGCCACTTC
ATCCTCGGCC AGGTCCCCAA TGACCTGCAG CAGAACCTGC AGCGCTTCGC CGACCTCGGC
GTGGAGGTCG CGCTGACCGA GGTCGACATC CGGATTCCGC TGCCGGTCAC CTCCGCCAAG
CTCGCCCAGC AGCGGGCCGA CTACGAGAAG GTGGTCCGGG CCTGCCTCGC CGTCTCCAAG
TGCGTGGGCG TCACCGTCTG GGGCGTCACG GACAAGTACT CCTGGGTGCC GGACGTCTTC
CCGGGCGAGG GCGCGGCGCT GCTGTTCGAC GACAACTACA ACCCCAAGCC CGCCTACGAC
GGCGTGGTCA CCGCCCTCGG CGGTGACTCG AGCCCGAGCC CGACCCCGAC TCTGACGCCC
TCGCCGATCC CCGACTCTCC GCCCAGCCCG CCGCCGAGCA GCGGATGCAC CGCCACCTAC
CGGCTCGTCA ACGAATGGCC CGGCGGCTTC CAGGCCGAGG TGACGGTCAG CAACAACGGC
ACGTCACCGA TCAACGGGTG GACCGTGTCC TGGTCGTTCC CGAGCGGCCA GACCATCACC
CAGCTCTGGA ACGGCGAGCA CACCCAGTCG GGCGCCAACG TGACCGTGCG GAACGTCTAC
TACAACGGCA ACGTCGCGCC CGGTGCCTCC ACCTCGTTCG GGTTCCTCGG CAGCTTCTCC
GGCAGCAACG GCGCCCCGTC GTCGGTGAGC TGCACGGCAT CCTGA
 
Protein sequence
MSVRSPRRHA WKIGLALLIG VIPAVATATT ADAAAPLRQL AEAKGIYFGT AVAANRLGES 
QYVQVLDREF NSVTPENEMK WDATEPSRNS FNFGSADQIV NHAQANGQII RGHTLVWHSQ
LPSWVSNGNW TASELTQVME NHISNVAGRY RGKLYAWDVV NEAFNEDGTR RQTVFQRVLG
DGYIATAFRA ARAADPTAKL YYNDYNIEGI NAKSNAVYNM VRQFKQQGVP IDGVGFQGHF
ILGQVPNDLQ QNLQRFADLG VEVALTEVDI RIPLPVTSAK LAQQRADYEK VVRACLAVSK
CVGVTVWGVT DKYSWVPDVF PGEGAALLFD DNYNPKPAYD GVVTALGGDS SPSPTPTLTP
SPIPDSPPSP PPSSGCTATY RLVNEWPGGF QAEVTVSNNG TSPINGWTVS WSFPSGQTIT
QLWNGEHTQS GANVTVRNVY YNGNVAPGAS TSFGFLGSFS GSNGAPSSVS CTAS