Gene Tbis_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1708 
Symbol 
ID9168202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1977537 
End bp1979186 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content76% 
IMG OID 
Product2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase 
Protein accessionYP_003652314 
Protein GI296269682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCGG CGACCGCGCT CGCGACCGTG CTCGTCGACG AGCTGGTCCG CTGCGGGATG 
ACCGACGTGG TGCTCGCCCC CGGCTCCCGC TCGGCGCCGC TCGCCCTCGC GGTGCACAAC
GAGCCGCGCC TCAGGCTGCA CGTCCGCATC GACGAGCGCT CGGCCTCCTT CCTCGCCCTG
GGGCTGGCCA AGCGCTCCGA GCGGCCGGTC GCCGTCATCT GCACCTCGGG CACGGCCGCG
GCCAACCTCC ACCCGGCCGT CATCGAGGCG TCCGAGGCCG GCGTGCCCCT GCTCGTGCTC
ACCGCCGACC GGCCGCCCGA GCTGCGCGGC ACCGGGGCGA ACCAGACGAT CGACCAGATC
AAGCTGTACG GCTCCGCGGT GCGGTGGTTC GCCGAGGTCG GCGTGCCCGA GGAGCGGCCC
GGCCAGGTCG CCTACTGGCG GTCGCTCGTC GCCCGCGCCT ACCACCGGGC GCTCGGGCCG
TCCGACCCCG GCCCGGTCCA CCTCAACCTC GCCTTCCGGG AGCCGCTCAT CCCCGACGGG
GACACGAACT GGTGCGAGCC GCTCGGCGGG GACGCCACCG GCGCCTGGGT GCGGACCCGG
GTCGCCCCGC CCGCGCCGGC CCTCCACCTC CCGCCGGTCC GCCGGGGCGT GCTCGTCATC
GGCGACGGCG CGACCAACGT CCGGCGCTAC GTGGCCGCGG CCGGGATGGC CGGGTGGCCG
GTGCTCTCCG AGCCCAACGG CAACGGGCGG TACGGCGACA CGGCGATCTC CACCTACCAC
TTCCTCCTGG GGGATCCCGC CTTCGCCGAG GCGCACCGGC CCGACGTGGT GGTCACCCTC
GGCCGCCCCG GGCTCTCCCG CCCCCTGCTG TCGTGGCTGC GGACCGCGGG GGAGCACATC
GTGGTGACCG GCGACCTCAC CCGGTGGCCG GACCCGACCC GGTCGGCCAC GCAGGTGGTC
GAGGCCGTGG AGATCCCGAT CGCGTCCGGC GGGGACGACT GGCTGCGCTC GTGGCGGAAC
GCCGAGCGGC TGGCGCGGCA GGCGCTCGAC GAGGTGCTCG ACTCCACCGG CCTGAGCGAG
CCCCGCCTCG CCCGGGACCT GGTGGACCTG CTGCCCAACG GCTCGCTGCT GTTCTGCGGC
TCGTCCATGC CGATCCGGGA CCTCGACCAG ACCATGCGGC CGCGGCGCGG CGTGCGGGTG
ATGGCCGGCC GGGGCGCGTC GGGCATCGAC GGCCTGGTCT CCACGGCGAT CGGCGCGGCG
CTCGCGCACA ACGGCCCCTG CTACGCGCTG CTCGGGGACC TCTCCCTGCT GCACGACCAG
AACGGCCTGG TGATCGGCCC GCAGGAGCCC CGCCCCGACC TGTGCCTGGT GGTGGTGAAC
AACGACGGGG GCGGCATCTT CTCGCTGCTG CCCCAGGCGG CGCTCCGGGC CCCGTTCGAG
CGGGTGTTCG GCACCCCGCA CGGCGTCGAC CTCGGCCATG TCGCGGCCGC CCACGGCCTG
CCGTACACGC TCGTCGGCGA CATCGGCGAG CTGCCGCGGG CGATCAAGGG GGACGGGCTG
CGGCTCGTCG AGGTGCGCAC CGACCGCGAG CGGAACGCGG CGATCCACGC GGCGATGCGC
GACGCGGTGC GCGCGGCGAT CCGGGGATAG
 
Protein sequence
MNPATALATV LVDELVRCGM TDVVLAPGSR SAPLALAVHN EPRLRLHVRI DERSASFLAL 
GLAKRSERPV AVICTSGTAA ANLHPAVIEA SEAGVPLLVL TADRPPELRG TGANQTIDQI
KLYGSAVRWF AEVGVPEERP GQVAYWRSLV ARAYHRALGP SDPGPVHLNL AFREPLIPDG
DTNWCEPLGG DATGAWVRTR VAPPAPALHL PPVRRGVLVI GDGATNVRRY VAAAGMAGWP
VLSEPNGNGR YGDTAISTYH FLLGDPAFAE AHRPDVVVTL GRPGLSRPLL SWLRTAGEHI
VVTGDLTRWP DPTRSATQVV EAVEIPIASG GDDWLRSWRN AERLARQALD EVLDSTGLSE
PRLARDLVDL LPNGSLLFCG SSMPIRDLDQ TMRPRRGVRV MAGRGASGID GLVSTAIGAA
LAHNGPCYAL LGDLSLLHDQ NGLVIGPQEP RPDLCLVVVN NDGGGIFSLL PQAALRAPFE
RVFGTPHGVD LGHVAAAHGL PYTLVGDIGE LPRAIKGDGL RLVEVRTDRE RNAAIHAAMR
DAVRAAIRG