Gene Tbis_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1242 
Symbol 
ID9167734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1409325 
End bp1410623 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content73% 
IMG OID 
ProductXRE family transcriptional regulator 
Protein accessionYP_003651854 
Protein GI296269222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0223131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGTC AAGGTTCGAT CGGTGAGCGC ATCAAAATGC TCCGAAAGCA GCGCGGCCTT 
TCGCAGGCGC AGCTCGCTCA CCCGGAGTTG TCGGACAGTT ATGTCTCACT TATCGAAAGC
GGTAAGCGCA CGCCGACGCC CGCGGTGTTG GAGTTAATTG CGCAAAAGCT CGGCTGTTCG
CTCACGTACC TGATCAACGG GGTGACCAAC GAGGAGCTCG AGGAGATCGA GCTCGCGCTG
CGGTTCGCCC GGCTCGCCCT CGAGAACGGC GATCTCGCCG AGGCCCGCCG CCGGTACGCC
GAGCTGCTGG AGGACCGCAA CCTCGAGAGC CTGGCGGCGC AGCGGCAGGA CGCGCGGTTC
GGCTACGCCC TCGCCACCGA GGCCTGCGGC GACCTCGCCG AGGCGATCGA CGTGCTCCGC
TCGCTCCGCG ACGAGGACAC CGAGGGCCAG ACCCCCGAGC GGCGGATCCA GATCTCCATC
GCGCTCTGCC GCTGCTACCG CGAGTTCGGA GCGCTCCACG AGGCGGTCCA GGTCGGCGAG
GAGACCCTCG GGCTGCCGAA GGGGCGGCCC GAGTGGAACG ACGATCTGAT CGAGCTCGGC
TCCACGCTGC TCGCCGCCTA CATCGAGCGG GGCGACCTGC TGCGGGCGCG CCAGTTCTCC
GCCGAGCTGC TGTCCGCCGC CGAGTCGCTC GGCACGGCCC GGGCGATCGT CGCCGCCTGC
TGGAACGCCG CCATGATCGT CGGCCGGATC GGCTGCGGCG ATGAGGCGCT CTCCCTGGCC
GAACGGGCCC TCGCCGTGCA GTCGGAGAAC GGCGAGCCGC GCAACCTCGC CCGGCTCCGG
GCGGCCTACG CGGTCCTCCT GCGCCAGGTG CGCCCGGCCG AGGCGGCGCG GGCGCGGGAC
CTGCTGCTCC GGGCGCTGCG CGAGCTGGAG GAGTCGGCGG CCGGGGCCGC GGACGTCGTC
TCCTGCCTGA TCGACCTCGC CCGCGCGGAG ATCCAGCTCG GCGATCCGCA CGCGGCCGCC
GCGCACGCGC GCGCCGCCGC GGCCAAGGCG ACCGGCGGGA TGAGCTCCGC GGTGCTCGCC
GAGACCCACC TCGTGCTCGG CCTCGCCTGC TCGCTGCTCG GCCAGAACGA TCAGGCCCGC
GCCGAGCTCG ACTCGGCCGC GGAGCACCTC AAGCGCCTGC CCGCCACCCG GACGCTCGCG
GAGAAGTGGC GCGCCGTCGC CGAGCTGCGG GAACGGATCG GCGACGAGGA GGGGTGCGTG
GCCGACCACC AGCGCGCGCT CGCCTGCGTG GGGCTCTGA
 
Protein sequence
MASQGSIGER IKMLRKQRGL SQAQLAHPEL SDSYVSLIES GKRTPTPAVL ELIAQKLGCS 
LTYLINGVTN EELEEIELAL RFARLALENG DLAEARRRYA ELLEDRNLES LAAQRQDARF
GYALATEACG DLAEAIDVLR SLRDEDTEGQ TPERRIQISI ALCRCYREFG ALHEAVQVGE
ETLGLPKGRP EWNDDLIELG STLLAAYIER GDLLRARQFS AELLSAAESL GTARAIVAAC
WNAAMIVGRI GCGDEALSLA ERALAVQSEN GEPRNLARLR AAYAVLLRQV RPAEAARARD
LLLRALRELE ESAAGAADVV SCLIDLARAE IQLGDPHAAA AHARAAAAKA TGGMSSAVLA
ETHLVLGLAC SLLGQNDQAR AELDSAAEHL KRLPATRTLA EKWRAVAELR ERIGDEEGCV
ADHQRALACV GL