Gene Tbis_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1188 
Symbol 
ID9167678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1353736 
End bp1354839 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID 
ProductRpoD subfamily RNA polymerase sigma-70 
Protein accessionYP_003651803 
Protein GI296269171 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTACC ACGCCGCGAA GGAGAGGACC CGCGGCGGTG TCGCGATCGA TGACGTGGCC 
GTCGCGGCCG ACCGAACCGA GCCGTCCGAC GACGCGCTGG ACCGCGTCGT CCAGATGCTC
GCAGACGAGG ACCTCGAGGT CCTCGCCGCC GAGGACGAGG ACCCCATCAG GTTCGATGAG
GAGGACTTCG ACTCAGGGGC GCCGACCAAC GACCTCGTCC GGATCTACCT CCGTGAGATC
GGCAAGGTCC CGCTGCTCAC GGCCGAGGAG GAGGTCGAGC TCGCCAAGGC CATCGAGGCG
GGACTGTTCG CAGAGGACAA GCTATGTGAG AAGAAGGCCG CCGGGATCGA GTGCCCCGAG
CTGGAGGACC TGGTCTGGGA GGGCATCCGG GCCAAGCAGC GGCTCATCGA GGCGAACCTG
CGGCTCGTCG TCTCCATCGC CAAGCGGTAC GTGGGCCGGG GCATGCTCTT CCTCGACCTC
ATCCAGGAGG GGAACCTCGG CCTGATCCGC GCGGTCGAGA AGTTCGACTA CACCAAGGGC
TACAAGTTCT CGACCTATGC CACGTGGTGG ATCCGGCAGG CGATCACCCG GGCGATCGCC
GACCAGGCCC GCACCATCCG GATCCCGGTG CACATGGTCG AGACGATCAA CAAGCTCGTC
CGGGTGCAGC GCCAGCTCCA CCAGGACCTC GGCCGGGAGC CGACCCCCGA GGAGATCGCC
AAGGAGATGG ACCTGCCCGT CGAGCGGGTG GTGGAGATCC AGCGCATCGC GCAGGAGCCC
GTCTCCCTCC AGTCGCCGAT CGGCGAGGAG GACTCCGACC TCGGCGACTT CATCGAGGAC
GCCGACGCCG TGGTGCCCCT GGAGGCAGCC GCGTTCATCC TGCTCCAGGA CCACCTCGAC
GACATCCTCT CCACGCTCTC CGAGCGGGAG CAGCGGATCA TCCAGCTCCG GTTCGGCCTC
GCCGACGGCC ACCCGCGGAC GCTTGAGGAG GTCGGCCGGG AGTTCGGCGT CACCCGGGAG
CGGATCCGGC AGATCGAGTC GAAGACGCTG GCGAAGCTCC GCCATCCGAC GCGGGCCCAG
GTGCTCCGGG ACTACCTGGA CTAG
 
Protein sequence
MAYHAAKERT RGGVAIDDVA VAADRTEPSD DALDRVVQML ADEDLEVLAA EDEDPIRFDE 
EDFDSGAPTN DLVRIYLREI GKVPLLTAEE EVELAKAIEA GLFAEDKLCE KKAAGIECPE
LEDLVWEGIR AKQRLIEANL RLVVSIAKRY VGRGMLFLDL IQEGNLGLIR AVEKFDYTKG
YKFSTYATWW IRQAITRAIA DQARTIRIPV HMVETINKLV RVQRQLHQDL GREPTPEEIA
KEMDLPVERV VEIQRIAQEP VSLQSPIGEE DSDLGDFIED ADAVVPLEAA AFILLQDHLD
DILSTLSERE QRIIQLRFGL ADGHPRTLEE VGREFGVTRE RIRQIESKTL AKLRHPTRAQ
VLRDYLD