| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1085 |
|---|
| Symbol | |
|---|
| ID | 9167575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 1231293 |
|---|
| End bp | 1232096 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003651700 |
|---|
| Protein GI | 296269068 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00605708 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.00179082 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATTC TCATCACCGG TGCTGCGGGC GGCGTCGGCA CGCTGCTGCG CCCCCGCCTG
GCCCGGCAAG GGCGGGTTCT GCGCCTGCTC GACATCGCCC CGATCGAGGC CGGACCGGGC
GAGGAGGCGG TGACCGCCGA CATCACCGAC CCCAAGGCCA TGGCCGAGGC GATGGACGGC
GTCGACGCGG TGCTCCACCT GGGCGGGCAC AGCCTGGAAC GGGCGTGGGA GGAGATCCTC
CACGTCAACA TCCACGGCAC CTATGTGGTG CTCGAGGCGG CGCGGAGGGC CGGGGTACGG
CACGCGGTGC TGGCGAGCAG CAACCACGCG GCCGGCTTCC ACCCCCGGTC GGCCGGGGAG
GCCCCTGACT ACCTCTTCCC CCGCCCGGAC ACCTACTACG GCGTGAGCAA GGTCGCGGTC
GAGGCGCTCG GCTCGCTTTA CCACGACCGG TACGGCATGC ACGTCACCTG CCTGCGGATC
GGCTCGTGCT TCGAGCGGCC CAAGGACACC CGCATGCTCT CCACCTGGCT CTCCCCGGAC
GACTGCGCCC GCCTCGTCGA GGCGGCGCTC ACCGCCGAGG GGTTCCACGT CGTCTGGGGC
ATCTCGGCCA ACACCCGGCG CTGGTGGTCG CTCGAGGAGG GCCGCGCCAT CGGCTACGAG
CCGCAGGACG ACGCCGAGGT CTTCGCCGCC GAGCTCATCG CCGAGCACGG CGAGCCGGAC
CCGGAGGACA TCGCCCACCG CTACCTGGGC GGCGCGTTCT GCGGCCCCCG GTACCACGCC
GACAACCTGA CGGGGGGACG GTGA
|
|---|
| Protein sequence | MRILITGAAG GVGTLLRPRL ARQGRVLRLL DIAPIEAGPG EEAVTADITD PKAMAEAMDG
VDAVLHLGGH SLERAWEEIL HVNIHGTYVV LEAARRAGVR HAVLASSNHA AGFHPRSAGE
APDYLFPRPD TYYGVSKVAV EALGSLYHDR YGMHVTCLRI GSCFERPKDT RMLSTWLSPD
DCARLVEAAL TAEGFHVVWG ISANTRRWWS LEEGRAIGYE PQDDAEVFAA ELIAEHGEPD
PEDIAHRYLG GAFCGPRYHA DNLTGGR
|
|---|
| |