| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1003 |
|---|
| Symbol | |
|---|
| ID | 9167490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | - |
|---|
| Start bp | 1129685 |
|---|
| End bp | 1131235 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | PucR family transcriptional regulator |
|---|
| Protein accession | YP_003651619 |
|---|
| Protein GI | 296268987 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.481265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.280145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGACA GCACACTGAC CGTGGAGCAC CTGATCCGGG CCCCGGCCCT CCAGCTCCGC
GTGCTCGCCG GGCACCGCGG ACTCGACCGG TCCGTCTCCT GGGCGCACGT CAGCGAGCTC
GAGGACCCGA CACCGTGGCT GCTCGGCGCG GAGATCATCA TGACCACCGG GATCGGCGTG
CCCCGCGACC CGGACGCGCA GCGCGCCTAC CTCGAGCGGC TCGACGACGC CGGGGTCGCG
GCGCTCGCCC TCAGCGCCGG CCTCCACGTG CCCCCGCTCT CCCCCGCCTT CTTCGCGGCC
GCCGAGGAGC GCGGCTTCCC GGTGCTCGAG GTGCCGCTCG CCGTCCCCTT CATCGCCATC
GCCCAGGAGG TCGCGGCCGC GGTCCAGGAG GACCAGCGGC AGCGGCTCGG CGCCCAGCTC
CAGGTGTTCG GCGCGCTCCG CTGGATCGCC TCCGAAGGGC TCGACCCGGC CGGGCTCTTC
CGGCGGCTGG AGCGGCTCTC CGGGTACGAC GTCTACCTGA GCACCCCGCA GGGGCGCCCG
CTGCTGCCCG GGGTGCCCGT GCCGCCGCCC ACGGTCCCCC TGCCCACCTC GGCCGACACC
GCGCCCACCA TCCCCGGCGG CTTCGTCCTG CCCGTGCCCG CCCCGGACGG CCCGGCCGGG
TTCCTCGTCG CCCTCGAGCG CGAGGGCGCG CGGCCCGCCG GGCTCGCCGT CGTCCAGCAC
ATCGCGACCG TCGCCGCCCT CCAGGTGGCG ATGGTGCGCA GCGAACGGGA GACCCTACGC
CGGCAGGGCG CCGAGACCCT GGCCGAGCTG CTGCAGGACG TGCTCGATCC GGCCGCCGCC
CGCCGGCGGC TCGCCCGGAT GGGCCTGCCG CCCGGCGCGG ACGTGGTGCT GATCGCGGTG
CGGCGGGCGC CCGAGGAGGC CGTGGTCCAG GCGCTCGACG AGTTCCCGCA CCTGATGCTC
CGCCACCACG AGACCCTCTT CGTGCTCGCC CCCCACCTCG TTGCCGGCCC CGGCGGCGCG
GAGCGGCTGC CGGTGTACGA GGCGGCGCGG CTGCGCGACA TCCCCGGCAT CGCGGCCGGG
GTGAGCCGGC CGCTGGCCCA AGGGGACCCC CTCCGGATCG CCCGGCGCGA GGCGCTCTGG
GCCGCCTCCC GGGCGGCCGA GTCCGGGCAG CCGTTGGTGG CCTACGGGGA GGACCCCATG
GGCCGGTGGC TGCCCGACGA CGTGAACGTC CTCTCCGACC TGGTCGAGCA CGTGCTCGGC
GACGTGCTCC GGTACGACGC GGAGCACGGT TCGCAGCTCC TCGTCTCGGT CCGCACCTGG
ATGGAGCGCG ACCGCCGCCT GGAGGACGCG GCGAAGGCGC TCCACATCCA CGCGAACACG
CTCGCCTACC GGCTGCGCCG CTTCGGCGCG CTCACCGGCC GCGACCTCAC CACCACCGCC
GACTTCGCCG AGGTGTGGCT CGCCATCCGG GCCGCCGAGC AGCTCGGCGT GGCCTCCGGC
GGGCCCGCGC CGGGAGAGGA ACACGCCCGG CGGGACCGGC GCCCCGGCTG A
|
|---|
| Protein sequence | MGDSTLTVEH LIRAPALQLR VLAGHRGLDR SVSWAHVSEL EDPTPWLLGA EIIMTTGIGV
PRDPDAQRAY LERLDDAGVA ALALSAGLHV PPLSPAFFAA AEERGFPVLE VPLAVPFIAI
AQEVAAAVQE DQRQRLGAQL QVFGALRWIA SEGLDPAGLF RRLERLSGYD VYLSTPQGRP
LLPGVPVPPP TVPLPTSADT APTIPGGFVL PVPAPDGPAG FLVALEREGA RPAGLAVVQH
IATVAALQVA MVRSERETLR RQGAETLAEL LQDVLDPAAA RRRLARMGLP PGADVVLIAV
RRAPEEAVVQ ALDEFPHLML RHHETLFVLA PHLVAGPGGA ERLPVYEAAR LRDIPGIAAG
VSRPLAQGDP LRIARREALW AASRAAESGQ PLVAYGEDPM GRWLPDDVNV LSDLVEHVLG
DVLRYDAEHG SQLLVSVRTW MERDRRLEDA AKALHIHANT LAYRLRRFGA LTGRDLTTTA
DFAEVWLAIR AAEQLGVASG GPAPGEEHAR RDRRPG
|
|---|
| |