| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_0993 |
|---|
| Symbol | |
|---|
| ID | 9167480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 1119230 |
|---|
| End bp | 1120606 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_003651609 |
|---|
| Protein GI | 296268977 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.566125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.236668 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGG CGCTGATCGA GGAGCTGGGC GAGGCCGCCG GGATCGACCT GCCGCCGGTG
CGGGTGACCG GCGGCGAGCC CGCGCTGCCC TCGGTCTTCC CGATCGGCAC GGCCGCCGCC
GCGTGCGTCG GCGCGCTCAC CGGAGCCGTG GCCCGGTACG CGCGGCGCGG GCCCGGCCGG
TCGGGGCGGG ACCCCGAGGT CCTCGTCGAT GTCCGGCATG CGGCGGAGGC CTTCCGCAGC
GAGCGGCATT TCCGGGTCGA CGGCCGGCCG ATCGACCTGT GGGCGCCGCT GTCGGGCGAC
TACCGCACCC GGGACGGCTG GGTCCGGCTG CACTGCAACT TCGCGCACCA CCGGGACGCG
GCGCTCCGGG CGCTGAGCCT GCCCGCCGGG GCGGACGCGG AGGACGTCGG CCGGGCGTGC
GCGAGCCGTA CCGCGATCGA GATCGAGGAG GCGGTGATCC GCGAGGGCGG GTGCGCGGCC
GCGATGCGGA CCCGGGCCGA GTGGCTGGCG CACCCTCAGT CGCGCGCGGT GGCCGGGCTG
CCCCTGGTCG GCCTCGCCCG GCTGCCGGGA CCATCCGGTC CTCACGAGCG GGAGGCGAGC
GGAGCCCCGG ACCGGCCGCT GCGCGGCGTC CGGGTGCTCG ATCTGAGCCG GGTGATCGCG
GGCCCGGTCG CCGCCCGCAC GCTCGCCGCG CACGGCGCCG AGGTGCTGCG GGTCGGCGCG
GCGCACCTGC CCGAGGTGCC GGGGCTCGTC GTGGAGACCG CGTTCGGCAA GCGGTCGTGC
CACATCGACC TGCGCCGGGA GCCCGAGACG CTGCGGGAGC TGGTACGGCG GGCCGACGTC
GTCATCCAGG CCTACCGGCC GGGCGCGCTG CGCGCCAGGG GCTTCGGCCC CGAGGACCTC
GCCCGGCTGC GGCCGGGCAT CGTCTGCGTG GACATCTCCG CGTACGGCTC CCGCGGCCCG
TGGGCCGGCC GGCGGGGGTT CGACAGCCTG GTCCAGATGG CGTGCGGGAT CGCCCATGAG
AACGGTGACG GCACCCGCCC GGCCCCGCTC CCGGCCCAGG CGCTCGACCA CGGCACCGGC
TGGCTGGCCG CGTTCGGCGC GGTCGCCGGC CTGCTGCGCC GCGGCGCGGA GGGCGGCTCC
TGGCACGTCG AGGTCTCCCT GGCCCGGACC GCCAAGTGGC TCGACGACCT CGGCCGGGTG
GACGGCGGCC ATGTCCCGCC CCCGGCCGAC GACCTGCTGG CGACGATGGA CAGCCCGTTC
GGCACGCTCA CCTATGTGCG GCCACCGGGC CTGATCGACG GAGCGGAGCC GTACTGGGCC
GCTCCGCCGC CCCGGCCGGG CGAGCATCCT CCGGCGTGGC CGGCCGGCGC GGAATGA
|
|---|
| Protein sequence | MIEALIEELG EAAGIDLPPV RVTGGEPALP SVFPIGTAAA ACVGALTGAV ARYARRGPGR
SGRDPEVLVD VRHAAEAFRS ERHFRVDGRP IDLWAPLSGD YRTRDGWVRL HCNFAHHRDA
ALRALSLPAG ADAEDVGRAC ASRTAIEIEE AVIREGGCAA AMRTRAEWLA HPQSRAVAGL
PLVGLARLPG PSGPHEREAS GAPDRPLRGV RVLDLSRVIA GPVAARTLAA HGAEVLRVGA
AHLPEVPGLV VETAFGKRSC HIDLRREPET LRELVRRADV VIQAYRPGAL RARGFGPEDL
ARLRPGIVCV DISAYGSRGP WAGRRGFDSL VQMACGIAHE NGDGTRPAPL PAQALDHGTG
WLAAFGAVAG LLRRGAEGGS WHVEVSLART AKWLDDLGRV DGGHVPPPAD DLLATMDSPF
GTLTYVRPPG LIDGAEPYWA APPPRPGEHP PAWPAGAE
|
|---|
| |